RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Znf335A2A5K6 1337 aa9.07□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Exoc6bA6H5Z3 810 aa9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Sirt1Q923E4 737 aa9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 CalcaP70160 136 aa9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Atp8b2P98199 1209 aa9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 PsapQ61207 557 aaKnown RBP9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Smc3Q9CW03 1217 aaKnown RBP9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Cyp27a1Q9DBG1 533 aa9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 AcrbpQ3V140 540 aa9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Arid3aQ62431 601 aa9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Tmem132eQ6IEE6 982 aa9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Tmem132aQ922P8 1018 aa9.06□□□□□ -0.96
Bdnf-207ENSMUST00000111047 RestQ8VIG1 1082 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Nlgn1Q99K10 843 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 LlphQ9D945 130 aaKnown RBP9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Dmrtc1Q9D9R7 182 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Qser1A2BIE1 1698 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 AdgbG3UZ78 1657 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Zkscan16A2ALW2 728 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 EvcP57680 1005 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 CgnP59242 1191 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Map3k13Q1HKZ5 959 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Tmx3Q8BXZ1 456 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Tshz3Q8CGV9 1081 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Ercc6l2Q9JIM3 1537 aa9.05□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Pdia4P08003 638 aaKnown RBP9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Gimap6Q8K349 305 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Fmnl2A2APV2 1086 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Syce3B5KM66 88 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Mmp8O70138 465 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Ddx11Q6AXC6 880 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 4931400O07RikQ9D4M5 137 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Mcmdc2E9Q956 681 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Znf326O88291 580 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Idi1P58044 227 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Cct4P80315 539 aaKnown RBP9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Cpa2Q504N0 417 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Btbd11Q6GQW0 1109 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Fez1Q8K0X8 392 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Arhgef28P97433 1693 aa9.04□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Cers3Q1A3B0 383 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Gdpd2Q9ESM6 539 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Gm10471E9Q1C7 252 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Anapc15P60007 132 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Cchcr1Q8K2I2 770 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Chmp7Q8R1T1 451 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Iffo2Q8R2V2 512 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Noc3lQ8VI84 807 aaKnown RBP9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Gemin5Q8BX17 1502 aaKnown RBP9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Hoxc9P09633 260 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Rassf8Q8CJ96 419 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Top1mtQ8R4U6 593 aa9.03□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Fbxo2Q80UW2 297 aa9.02□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Sh3bp5Q9Z131 463 aa9.02□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Tmem94Q7TSH8 1360 aa9.02□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Strn4P58404 760 aa9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Pes1Q9EQ61 584 aaKnown RBP9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Nckap5lQ6GQX2 1323 aa9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Zap70P43404 618 aa9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 GphnQ8BUV3 769 aaKnown RBP9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Brf1Q8CFK2 676 aa9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Amotl2Q8K371 772 aa9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Sf3a1Q8K4Z5 791 aaKnown RBP9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Gys2Q8VCB3 704 aa9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Eif3aP23116 1344 aaKnown RBP9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Stk36Q69ZM6 1316 aa9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Ddx19aQ61655 478 aaKnown RBP9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Q9D9S1 216 aa9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Ripk4Q9ERK0 786 aa9.02□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Gjb2Q00977 226 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Usp48Q3V0C5 1052 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Nap1l3Q794H2 544 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Echdc1Q9D9V3 322 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Abca14E9Q8F8 1683 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 FancaQ9JL70 1439 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Prune1Q8BIW1 454 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Pof1bQ8K4L4 587 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Kcnh5Q920E3 988 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Amotl1Q9D4H4 968 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 CltcQ68FD5 1675 aaKnown RBP9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 MpndQ3TV65 487 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Rnf20Q5DTM8 973 aa9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Foxp4Q9DBY0 795 aaKnown RBP9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Mad1l1Q9WTX8 717 aaKnown RBP9.01□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Usp32F8VPZ3 1604 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Ier5O89113 308 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 EngaseQ8BX80 734 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Utp3Q9JI13 469 aaKnown RBP9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Ift172Q6VH22 1749 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Dip2aQ8BWT5 1523 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Ccdc173A0JLY1 547 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Samd1D3YXK1 519 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Rad17Q6NXW6 688 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Igsf1Q7TQA1 1317 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Gm45015A0A140LII9 184 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Gm18336A0A140LIU8 765 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Tpx2A2APB8 745 aaKnown RBP9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 R3hcc1Q8BSI6 488 aa9□□□□□ -0.97
Bdnf-207ENSMUST00000111047 NktrP30415 1453 aa8.99□□□□□ -0.97
Bdnf-207ENSMUST00000111047 Gadd45bP22339 160 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms