RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Soga3Q6NZL0 945 aa11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Edc3Q8K2D3 508 aaKnown RBP11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Farp2Q91VS8 1065 aa11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Uggt2E9Q4X2 1504 aa11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Adgrl3Q80TS3 1537 aa11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Abca8bQ8K440 1620 aa11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Cavin2Q63918 418 aaKnown RBP11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Hnrnpul1Q8VDM6 859 aaKnown RBP11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Slx4ipQ9D7Y9 413 aa11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Ttc41Q692V3 1318 aa11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Atp8b2P98199 1209 aa11.46□□□□□ -0.57
Trim9-201ENSMUST00000110520 EappQ5BU09 281 aa11.46□□□□□ -0.57
Trim9-201ENSMUST00000110520 Samm50Q8BGH2 469 aa11.46□□□□□ -0.57
Trim9-201ENSMUST00000110520 BccipQ9CWI3 316 aa11.46□□□□□ -0.57
Trim9-201ENSMUST00000110520 Lmbr1lQ9D1E5 489 aa11.46□□□□□ -0.57
Trim9-201ENSMUST00000110520 Stard3nlQ9DCI3 235 aa11.46□□□□□ -0.57
Trim9-201ENSMUST00000110520 Becn1O88597 448 aa11.46□□□□□ -0.58
Trim9-201ENSMUST00000110520 Fkbp5Q64378 456 aa11.46□□□□□ -0.58
Trim9-201ENSMUST00000110520 Aldh8a1Q8BH00 487 aa11.46□□□□□ -0.58
Trim9-201ENSMUST00000110520 RestQ8VIG1 1082 aa11.46□□□□□ -0.58
Trim9-201ENSMUST00000110520 Gadd45bP22339 160 aa11.46□□□□□ -0.58
Trim9-201ENSMUST00000110520 Rbm27Q5SFM8 1060 aaKnown RBP11.46□□□□□ -0.58
Trim9-201ENSMUST00000110520 Ush1cQ9ES64 910 aa11.46□□□□□ -0.58
Trim9-201ENSMUST00000110520 Ercc3P49135 783 aa11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 Irf9Q61179 399 aa11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 GckrQ91X44 587 aa11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 Tpx2A2APB8 745 aaKnown RBP11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 Mcm3P25206 812 aaKnown RBP11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 Nol11Q8BJW5 723 aaKnown RBP11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 Olfml1Q8BSH2 233 aa11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 Slc5a1Q8C3K6 665 aa11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 Ppp6r3Q922D4 844 aa11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 Wdr78E9PYY5 807 aa11.45□□□□□ -0.58
Trim9-201ENSMUST00000110520 Echdc1Q9D9V3 322 aa11.44□□□□□ -0.58
Trim9-201ENSMUST00000110520 Rims1Q99NE5 1463 aa11.44□□□□□ -0.58
Trim9-201ENSMUST00000110520 Il4rP16382 810 aa11.44□□□□□ -0.58
Trim9-201ENSMUST00000110520 Zbtb3Q91X45 518 aa11.44□□□□□ -0.58
Trim9-201ENSMUST00000110520 Astn2Q80Z10 1352 aa11.44□□□□□ -0.58
Trim9-201ENSMUST00000110520 4930572O03RikQ8C5Y0 211 aa11.44□□□□□ -0.58
Trim9-201ENSMUST00000110520 Cchcr1Q8K2I2 770 aa11.44□□□□□ -0.58
Trim9-201ENSMUST00000110520 Glipr1l2Q9CQ35 332 aa11.44□□□□□ -0.58
Trim9-201ENSMUST00000110520 Cct4P80315 539 aaKnown RBP11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Prkab2Q6PAM0 271 aa11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Synj2Q9D2G5 1434 aa11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Cyb5rlB1AS42 316 aa11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Mcmdc2E9Q956 681 aa11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Ier5O89113 308 aa11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Abl1P00520 1123 aa11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Polr3dQ91WD1 398 aa11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 LratQ9JI60 231 aa11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Adgrl1Q80TR1 1466 aa11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Zcchc11B2RX14 1644 aaKnown RBP11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 PhaxQ9JJT9 385 aaKnown RBP11.43□□□□□ -0.58
Trim9-201ENSMUST00000110520 Irgm2A0A140LIF8 407 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Bag3Q9JLV1 577 aaKnown RBP11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Myom2Q14BI5 1463 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Zkscan16A2ALW2 728 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Kif20aP97329 887 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 IbspQ61711 324 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Uggt1Q6P5E4 1551 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Psma5Q9Z2U1 241 aaKnown RBP11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Chl1P70232 1209 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 VeztQ3ZK22 780 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Ddx46Q569Z5 1032 aaKnown RBP11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Arhgef1Q61210 920 aaKnown RBP11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 ApobrQ8VBT6 942 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Amotl1Q9D4H4 968 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 CrcpO35427 148 aa11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 MsnP26041 577 aaKnown RBP11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Gigyf1Q99MR1 1044 aaKnown RBP11.42□□□□□ -0.58
Trim9-201ENSMUST00000110520 Mmp8O70138 465 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Strn4P58404 760 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Eif3bQ8JZQ9 803 aaKnown RBP11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Znf521Q6KAS7 1311 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Dnajc2P54103 621 aaKnown RBP11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Aldh1l2Q8K009 923 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Rbm10Q99KG3 930 aaKnown RBP11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Tbc1d7Q9D0K0 293 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Phf14Q9D4H9 881 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Mlh1Q9JK91 760 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Kif24Q6NWW5 1356 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Robo2Q7TPD3 1470 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Eif3aP23116 1344 aaKnown RBP11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 EspnlQ3UYR4 1005 aa11.41□□□□□ -0.58
Trim9-201ENSMUST00000110520 Kidins220E9Q9B7 1793 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 Tlr7P58681 1050 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 OptnQ8K3K8 584 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 Flad1Q8R123 492 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 FancaQ9JL70 1439 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 Cep170bQ80U49 1574 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 Zbtb21E9Q444 1094 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 Ccdc66Q6NS45 935 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 Plxnc1Q9QZC2 1574 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 Cplx1P63040 134 aa11.4□□□□□ -0.58
Trim9-201ENSMUST00000110520 Setd1aE9PYH6 1716 aa11.4□□□□□ -0.59
Trim9-201ENSMUST00000110520 Chd1P40201 1711 aa11.4□□□□□ -0.59
Trim9-201ENSMUST00000110520 Grm8P47743 908 aa11.39□□□□□ -0.59
Trim9-201ENSMUST00000110520 Tm6sf1P58749 370 aa11.39□□□□□ -0.59
Trim9-201ENSMUST00000110520 Clcn1Q64347 994 aa11.39□□□□□ -0.59
Trim9-201ENSMUST00000110520 Spty2d1Q68FG3 682 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 170.5 ms