RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Tmem119Q8R138 280 aa14.15□□□□□ -0.14
Vamp1-202ENSMUST00000063588 Disp3A3KFU9 1347 aa14.14□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Prkar2bP31324 416 aa14.14□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Mcm2P97310 904 aa14.14□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Eif4g2Q62448 906 aaKnown RBP14.14□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Slx1bQ8BX32 270 aa14.14□□□□□ -0.15
Vamp1-202ENSMUST00000063588 4930572O03RikQ8C5Y0 211 aa14.14□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Kif18aQ91WD7 886 aa14.14□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Pdzd9Q9D9M4 266 aa14.14□□□□□ -0.15
Vamp1-202ENSMUST00000063588 CarsQ9ER72 831 aaKnown RBP14.14□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Stk36Q69ZM6 1316 aa14.13□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Nkx1-2P42580 305 aa14.13□□□□□ -0.15
Vamp1-202ENSMUST00000063588 4930567H17RikQ3V0K5 233 aa14.13□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Ssfa2Q922B9 1252 aa14.13□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Atg3Q9CPX6 314 aa14.13□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Gcc1Q9D4H2 778 aa14.13□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Phkg2Q9DB30 406 aa14.13□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Hoxa7P02830 229 aa14.12□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Morc2aQ69ZX6 1030 aa14.12□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Zranb3Q6NZP1 1069 aa14.12□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Fam13aQ8BGI4 693 aa14.12□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Echdc1Q9D9V3 322 aa14.12□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Triml2E9PW10 424 aa14.11□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Gnai2P08752 355 aaKnown RBP14.11□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Aplp1Q03157 653 aa14.11□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Tbc1d32Q3URV1 1296 aa14.11□□□□□ -0.15
Vamp1-202ENSMUST00000063588 RgmbQ7TQ33 436 aa14.11□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Chmp7Q8R1T1 451 aa14.11□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Kat6bQ8BRB7 1872 aa14.1□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Hsp90ab1P11499 724 aaKnown RBP14.09□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Nkx2-3P97334 362 aa14.09□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Taf7Q9R1C0 341 aa14.09□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Cdhr2E9Q7P9 1308 aa14.09□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Wdr63B2RY71 923 aa14.08□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Pnmal2G3X9N3 661 aa14.08□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Arhgef1Q61210 920 aaKnown RBP14.08□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Dnai1Q8C0M8 701 aa14.08□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Eif3bQ8JZQ9 803 aaKnown RBP14.08□□□□□ -0.15
Vamp1-202ENSMUST00000063588 Tjp1P39447 1745 aaKnown RBP14.08□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Tnnt1O88346 262 aa14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Cyp2d11P24457 504 aa14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 CanxP35564 591 aaKnown RBP14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Zpr1Q62384 459 aa14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Cc2d1aQ8K1A6 943 aa14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 GckrQ91X44 587 aa14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Sart3Q9JLI8 962 aaKnown RBP14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Akap11E9Q777 1895 aa14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Atp8b2P98199 1209 aa14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Cog6Q8R3I3 657 aa14.07□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Txnrd1Q9JMH6 613 aa14.06□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Flt4P35917 1363 aa14.05□□□□□ -0.16
Vamp1-202ENSMUST00000063588 PappaQ8R4K8 1624 aa14.05□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Ddx60E9PZQ1 1711 aa14.05□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Tiam2Q6ZPF3 1715 aa14.05□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Pard3Q99NH2 1333 aa14.05□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Fkbp4P30416 458 aa14.05□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Iqsec3Q3TES0 1195 aa14.05□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Asic4Q7TNS7 539 aa14.05□□□□□ -0.16
Vamp1-202ENSMUST00000063588 PrkcshO08795 521 aa14.04□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Rabep1O35551 862 aa14.04□□□□□ -0.16
Vamp1-202ENSMUST00000063588 ChgaP26339 463 aaKnown RBP14.04□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Ppp1r9bQ6R891 817 aaKnown RBP14.04□□□□□ -0.16
Vamp1-202ENSMUST00000063588 FanclQ9CR14 375 aa14.04□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Adcy9P51830 1353 aa14.03□□□□□ -0.16
Vamp1-202ENSMUST00000063588 HellsQ60848 821 aa14.03□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Bend3Q6PAL0 825 aa14.03□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Ccdc155Q80VJ8 648 aa14.03□□□□□ -0.16
Vamp1-202ENSMUST00000063588 SympkQ80X82 1284 aa14.03□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Nphp1Q9QY53 687 aa14.03□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Eif3aP23116 1344 aaKnown RBP14.03□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Mmp8O70138 465 aa14.02□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Ppp1r42Q8R1Z4 357 aa14.02□□□□□ -0.16
Vamp1-202ENSMUST00000063588 TefQ9JLC6 301 aa14.02□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Fam50bQ9WTJ8 334 aa14.02□□□□□ -0.16
Vamp1-202ENSMUST00000063588 Shank3Q4ACU6 1730 aa14.02□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Anapc15-psA0A140T8L6 141 aa14.01□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Irf9Q61179 399 aa14.01□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Eif2s2Q99L45 331 aaKnown RBP14.01□□□□□ -0.17
Vamp1-202ENSMUST00000063588 CenppQ9CZ92 286 aa14.01□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Atg4a-psA0A0G2JFS9 396 aa14□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Mum1Q6DID5 682 aa14□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Srgap3Q812A2 1099 aa14□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Slc5a1Q8C3K6 665 aa14□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Atg4aQ8C9S8 396 aa14□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Pdia6Q922R8 440 aaKnown RBP14□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Irx6Q9ER75 438 aa14□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Shank2Q80Z38 1476 aa14□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Ccdc146E9Q9F7 977 aa13.99□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Irx3P81067 507 aa13.99□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Speer4bQ9D9F7 267 aa13.99□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Cyp46a1Q9WVK8 500 aa13.99□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Mfap1aC0HKD8 439 aaKnown RBP13.98□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Mfap1bC0HKD9 439 aaKnown RBP13.98□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Mcmdc2E9Q956 681 aa13.98□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Sptbn5F6UCX4 1208 aa13.98□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Cers3Q1A3B0 383 aa13.98□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Mre11Q61216 706 aa13.98□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Gimap5Q8BWF2 308 aa13.98□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Zeb2Q9R0G7 1215 aa13.98□□□□□ -0.17
Vamp1-202ENSMUST00000063588 Erbb4Q61527 1308 aa13.98□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms