RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Tbc1d7Q9D0K0 293 aa20.23■□□□□ 0.83
Usp48-201ENSMUST00000055131 Kcnj4P52189 445 aa20.23■□□□□ 0.83
Usp48-201ENSMUST00000055131 Vps37dQ810I0 261 aa20.23■□□□□ 0.83
Usp48-201ENSMUST00000055131 Tmem67Q8BR76 992 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Slc12a5Q91V14 1138 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Kcnh5Q920E3 988 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Mum1Q6DID5 682 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Gps2Q921N8 327 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Q3UPC7 1272 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 NinlQ6ZQ12 1394 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Ccdc172Q810N9 267 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 ImpactO55091 318 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Znf692Q3U381 531 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Lrrfip1Q3UZ39 729 aaKnown RBP20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Polr3dQ91WD1 398 aa20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 Rai14Q9EP71 979 aaKnown RBP20.22■□□□□ 0.83
Usp48-201ENSMUST00000055131 GphnQ8BUV3 769 aaKnown RBP20.21■□□□□ 0.83
Usp48-201ENSMUST00000055131 NapbP28663 298 aa20.21■□□□□ 0.83
Usp48-201ENSMUST00000055131 Rcan3Q9JKK0 239 aa20.21■□□□□ 0.83
Usp48-201ENSMUST00000055131 Fbln2P37889 1221 aa20.21■□□□□ 0.83
Usp48-201ENSMUST00000055131 Mrvi1Q9WUX5 899 aaKnown RBP20.21■□□□□ 0.83
Usp48-201ENSMUST00000055131 Mug1P28665 1476 aa20.21■□□□□ 0.83
Usp48-201ENSMUST00000055131 ZgpatQ8VDM1 511 aa20.21■□□□□ 0.83
Usp48-201ENSMUST00000055131 Grin2aP35436 1464 aa20.2■□□□□ 0.82
Usp48-201ENSMUST00000055131 Mcm4P49717 862 aa20.2■□□□□ 0.82
Usp48-201ENSMUST00000055131 Cct2P80314 535 aaKnown RBP20.2■□□□□ 0.82
Usp48-201ENSMUST00000055131 Ppm1eQ80TL0 749 aa20.2■□□□□ 0.82
Usp48-201ENSMUST00000055131 Gm10563F6WIE4 79 aa20.2■□□□□ 0.82
Usp48-201ENSMUST00000055131 Il1rapl2Q9ERS6 686 aa20.2■□□□□ 0.82
Usp48-201ENSMUST00000055131 Luzp1Q8R4U7 1068 aaKnown RBP20.19■□□□□ 0.82
Usp48-201ENSMUST00000055131 Stxbp4Q9WV89 557 aa20.19■□□□□ 0.82
Usp48-201ENSMUST00000055131 Ddx58Q6Q899 926 aa20.19■□□□□ 0.82
Usp48-201ENSMUST00000055131 Dydc1Q9D9T0 175 aa20.19■□□□□ 0.82
Usp48-201ENSMUST00000055131 Tmc2Q8R4P4 888 aa20.19■□□□□ 0.82
Usp48-201ENSMUST00000055131 Mcm10Q0VBD2 885 aa20.19■□□□□ 0.82
Usp48-201ENSMUST00000055131 Q4VA45 678 aa20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Slc5a1Q8C3K6 665 aa20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Trim11Q99PQ2 467 aa20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Abcc5Q9R1X5 1436 aa20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Tbc1d9Q3UYK3 1264 aa20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Igf2bp2Q5SF07 592 aaKnown RBP20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 ScaperF8VQ70 1398 aaKnown RBP20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Trim55G3X8Y1 545 aa20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Zbtb21E9Q444 1094 aa20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Ddx19aQ61655 478 aaKnown RBP20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Tshz3Q8CGV9 1081 aa20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Zeb2Q9R0G7 1215 aa20.18■□□□□ 0.82
Usp48-201ENSMUST00000055131 Magi1Q6RHR9 1471 aa20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Znf653Q6YND2 615 aa20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Jade2Q6ZQF7 829 aa20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 GnpatP98192 678 aa20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Dmrt2Q8BG36 561 aa20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Igf1rQ60751 1373 aa20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Knop1Q9Z2Q2 478 aaKnown RBP20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Cavin1O54724 392 aa20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Cbx1P83917 185 aaKnown RBP20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Soga3Q6NZL0 945 aa20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Acsbg1Q99PU5 721 aa20.17■□□□□ 0.82
Usp48-201ENSMUST00000055131 Tspyl3Q3UYP3 334 aa20.16■□□□□ 0.82
Usp48-201ENSMUST00000055131 Txndc16Q7TN22 820 aa20.16■□□□□ 0.82
Usp48-201ENSMUST00000055131 SynmQ70IV5 1561 aa20.16■□□□□ 0.82
Usp48-201ENSMUST00000055131 NcapgE9PWG6 1004 aa20.16■□□□□ 0.82
Usp48-201ENSMUST00000055131 Rasa1E9PYG6 1038 aa20.16■□□□□ 0.82
Usp48-201ENSMUST00000055131 Hs1bp3Q3TC93 395 aa20.16■□□□□ 0.82
Usp48-201ENSMUST00000055131 Pcf11G3X9Z4 1553 aa20.16■□□□□ 0.82
Usp48-201ENSMUST00000055131 Elp1Q7TT37 1333 aaKnown RBP20.15■□□□□ 0.82
Usp48-201ENSMUST00000055131 EvcP57680 1005 aa20.15■□□□□ 0.82
Usp48-201ENSMUST00000055131 Ccdc66Q6NS45 935 aa20.15■□□□□ 0.82
Usp48-201ENSMUST00000055131 Ppfia3P60469 1194 aa20.15■□□□□ 0.82
Usp48-201ENSMUST00000055131 Hvcn1Q3U2S8 269 aa20.15■□□□□ 0.82
Usp48-201ENSMUST00000055131 Limch1Q3UH68 1057 aa20.15■□□□□ 0.82
Usp48-201ENSMUST00000055131 Gm1043A0A140LJC2 1431 aa20.15■□□□□ 0.82
Usp48-201ENSMUST00000055131 Ncapg2Q6DFV1 1138 aa20.15■□□□□ 0.82
Usp48-201ENSMUST00000055131 SrrtQ99MR6 875 aaKnown RBP20.15■□□□□ 0.82
Usp48-201ENSMUST00000055131 Nap1l5Q9JJF0 156 aa20.14■□□□□ 0.82
Usp48-201ENSMUST00000055131 InsrP15208 1372 aa20.14■□□□□ 0.82
Usp48-201ENSMUST00000055131 Fbf1A2A870 1173 aa20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 Bin1O08539 588 aaKnown RBP20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 Ripk4Q9ERK0 786 aa20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 Pik3r4Q8VD65 1358 aa20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 CalrP14211 416 aaKnown RBP20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 Chpf2Q3UU43 768 aa20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 Irf9Q61179 399 aa20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 Ccdc158Q8CDI6 1109 aa20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 Pde1cQ64338 706 aa20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 TxlnaQ6PAM1 554 aaKnown RBP20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 Cc2d1bQ8BRN9 848 aa20.14■□□□□ 0.81
Usp48-201ENSMUST00000055131 Polr3aB2RXC6 1390 aa20.13■□□□□ 0.81
Usp48-201ENSMUST00000055131 Brms1Q99N20 246 aa20.13■□□□□ 0.81
Usp48-201ENSMUST00000055131 Tacc1Q6Y685 774 aa20.13■□□□□ 0.81
Usp48-201ENSMUST00000055131 Map3k2Q61083 619 aa20.13■□□□□ 0.81
Usp48-201ENSMUST00000055131 Rnf34Q99KR6 376 aa20.13■□□□□ 0.81
Usp48-201ENSMUST00000055131 Cep120Q7TSG1 988 aa20.12■□□□□ 0.81
Usp48-201ENSMUST00000055131 IncenpQ9WU62 880 aa20.12■□□□□ 0.81
Usp48-201ENSMUST00000055131 Terf2O35144 541 aa20.12■□□□□ 0.81
Usp48-201ENSMUST00000055131 Ccdc150Q8CDI7 1110 aa20.12■□□□□ 0.81
Usp48-201ENSMUST00000055131 Rad23bP54728 416 aa20.12■□□□□ 0.81
Usp48-201ENSMUST00000055131 Tsg101Q61187 391 aa20.12■□□□□ 0.81
Usp48-201ENSMUST00000055131 Uri1Q3TLD5 531 aa20.11■□□□□ 0.81
Usp48-201ENSMUST00000055131 Stx6Q9JKK1 255 aa20.11■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms