RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Cavin4A2AMM0 362 aa27.42■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Pde4dQ01063 747 aa27.42■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Kndc1Q0KK55 1742 aa27.42■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Usp19Q3UJD6 1360 aa27.41■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Btbd11Q6GQW0 1109 aa27.41■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Emilin1Q99K41 1017 aa27.4■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Kcnq2Q9Z351 759 aa27.4■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Adcy9P51830 1353 aa27.4■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Spata31d1bE9QA57 1361 aa27.39■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 DiexfQ8BTT6 772 aaKnown RBP27.37■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 Sumf1Q8R0F3 372 aa27.36■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 Swt1Q9DBQ9 907 aa27.36■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 C4bP01029 1738 aa27.35■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 Mak16Q8BGS0 296 aaKnown RBP27.35■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 Ubr3Q5U430 1889 aa27.34■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 Msl1Q6PDM1 616 aa27.34■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 Uspl1Q3ULM6 1089 aa27.33■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 Chrna2Q91X60 512 aa27.33■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 PigbQ9JJQ0 542 aa27.33■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 Nav1Q8CH77 1875 aa27.33■■□□□ 1.97
Ssbp4-201ENSMUST00000049908 Prim1P20664 417 aa27.32■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 RtcbQ99LF4 505 aaKnown RBP27.32■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Lrrc43Q3V0L5 667 aa27.32■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Col23a1Q8K4G2 532 aa27.32■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Ubxn2bQ0KL01 331 aa27.31■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Dusp27Q148W8 1138 aa27.31■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Mylk2Q8VCR8 613 aa27.31■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Mtfr1lQ9CWE0 289 aa27.31■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Zfyve9A2A8R0 1397 aa27.3■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Ggnbp2Q5SV77 696 aa27.3■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Uhrf1bp1B2KF50 1429 aa27.29■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Sned1Q70E20 1403 aa27.29■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Syde2E9PUP1 1314 aa27.28■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Prom2Q3UUY6 835 aa27.28■■□□□ 1.96
Ssbp4-201ENSMUST00000049908 Clcn1Q64347 994 aa27.25■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Stra8P70278 393 aa27.25■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Cers3Q1A3B0 383 aa27.25■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Iqsec3Q3TES0 1195 aa27.25■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Col11a2Q64739 1736 aa27.24■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Zswim8Q3UHH1 1832 aaKnown RBP27.24■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Flad1Q8R123 492 aa27.24■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Irx6Q9ER75 438 aa27.24■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 TefQ9JLC6 301 aa27.24■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Ncbp3Q8BZR9 615 aaKnown RBP27.23■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 CrbnQ8C7D2 445 aa27.23■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 MetP16056 1379 aa27.23■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Nop58Q6DFW4 536 aaKnown RBP27.22■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Zbtb1Q91VL9 713 aa27.22■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Col1a2Q01149 1372 aa27.21■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Cnnm1Q0GA42 951 aa27.21■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Gm12185Q5NCB2 835 aa27.21■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Amhr2Q8K592 568 aa27.21■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 HmcesQ8R1M0 353 aaKnown RBP27.21■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Plch1Q4KWH5 1682 aa27.21■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Eif4a1P60843 406 aaKnown RBP27.2■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Nip7Q9CXK8 180 aaKnown RBP27.2■■□□□ 1.95
Ssbp4-201ENSMUST00000049908 Foxp4Q9DBY0 795 aaKnown RBP27.19■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Slfnl1Q8BHW9 410 aa27.19■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Kcna3P16390 528 aa27.17■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Hirip3Q8BLH7 601 aa27.17■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 CpzQ8R4V4 654 aa27.17■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Tlr8P58682 1032 aa27.15■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Ppm1fQ8CGA0 452 aa27.15■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Znrd1-asQ8R0E5 213 aa27.15■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Klhdc4Q921I2 584 aa27.15■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Taf7Q9R1C0 341 aa27.15■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Lrp5Q91VN0 1614 aa27.15■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Rad23bP54728 416 aa27.14■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Atp1b3P97370 278 aa27.14■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Prkab2Q6PAM0 271 aa27.14■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Gigyf1Q99MR1 1044 aaKnown RBP27.14■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 Speer4f1Q9D5Q6 258 aa27.14■■□□□ 1.94
Ssbp4-201ENSMUST00000049908 GckrQ91X44 587 aa27.13■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Pdia6Q922R8 440 aaKnown RBP27.13■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Rad21Q61550 635 aaKnown RBP27.13■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Ralbp1Q62172 648 aa27.13■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Cyp2d12Q8BVD2 504 aa27.13■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Egfem1Q8C088 590 aa27.13■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Prr29B1ARI9 187 aa27.12■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Pibf1E9Q6K3 756 aa27.12■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Magea6O89010 325 aa27.12■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Magea3Q6T340 320 aa27.12■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Senp3Q9EP97 568 aaKnown RBP27.12■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 1810065E05RikQ5NC41 235 aa27.11■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Srp68Q8BMA6 625 aaKnown RBP27.11■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Rapgef4Q9EQZ6 1011 aa27.11■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Dpf1Q9QX66 387 aa27.11■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Trip6Q9Z1Y4 480 aa27.11■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Nsfl1cQ9CZ44 370 aaKnown RBP27.1■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Gnai1B2RSH2 354 aa27.09■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Tnnt1O88346 262 aa27.09■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Gnai3Q9DC51 354 aa27.09■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Dlg5E9Q9R9 1921 aa27.09■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Bcl2l13P59017 434 aa27.08■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Neurod2Q62414 383 aa27.08■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 U2surpQ6NV83 1029 aaKnown RBP27.08■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Usp21Q9QZL6 566 aa27.08■■□□□ 1.93
Ssbp4-201ENSMUST00000049908 Col4a1P02463 1669 aa27.08■■□□□ 1.92
Ssbp4-201ENSMUST00000049908 Prr5lA2AVJ5 370 aa27.07■■□□□ 1.92
Ssbp4-201ENSMUST00000049908 Fkbp4P30416 458 aa27.07■■□□□ 1.92
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms