RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Irx4Q9QY61 515 aa17.87■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Pcmtd1P59913 357 aa17.87■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Zfp51Q3U4L8 781 aa17.87■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Ddx19aQ61655 478 aaKnown RBP17.87■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Tshz3Q8CGV9 1081 aa17.87■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Q9D9H8 365 aa17.87■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Cdk12Q14AX6 1484 aaKnown RBP17.87■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Spef2Q8C9J3 1734 aa17.86■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 NktrP30415 1453 aa17.86■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Strn4P58404 760 aa17.86■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Cc2d1aQ8K1A6 943 aa17.86■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Dnajc14Q921R4 703 aa17.86■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 PtprtQ99M80 1454 aa17.85■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Utp18Q5SSI6 552 aaKnown RBP17.85■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Ccdc7Q9D541 371 aa17.85■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Nphp1Q9QY53 687 aa17.85■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Arhgef28P97433 1693 aa17.85■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Atp2b3Q0VF55 1220 aa17.84■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Stk31Q99MW1 1018 aa17.84■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Lmod3E9QA62 571 aa17.84■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Pdzrn3Q69ZS0 1063 aa17.84■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Samm50Q8BGH2 469 aa17.84■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Utp3Q9JI13 469 aaKnown RBP17.84■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 4930407I10RikD3Z5T8 1512 aa17.84■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Elmsan1E9Q2I4 1089 aaKnown RBP17.83■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Wdr93Q402B2 695 aa17.83■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Jakmip1Q8BVL9 626 aa17.83■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Pabpn1Q8CCS6 302 aaKnown RBP17.83■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Naa30Q8CES0 364 aa17.83■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 SrrtQ99MR6 875 aaKnown RBP17.83■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Pibf1E9Q6K3 756 aa17.83■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Srgap3Q812A2 1099 aa17.83■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Med4Q9CQA5 270 aa17.83■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Kif20bQ80WE4 1774 aaKnown RBP17.83■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Ube2hP62257 183 aa17.82■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Idi2Q8BFZ6 227 aa17.82■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Gnai2P08752 355 aaKnown RBP17.82■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Nucb2P81117 420 aa17.82■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Ints3Q7TPD0 1041 aaKnown RBP17.82■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Mmel1Q9JLI3 765 aa17.82■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Sytl4Q9R0Q1 673 aa17.82■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Ythdc1E9Q5K9 736 aaKnown RBP17.81■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Abca14E9Q8F8 1683 aa17.81■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Zscan22Q8BGS5 496 aa17.81■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Slx4ipQ9D7Y9 413 aa17.81■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Pmfbp1Q9WVQ0 1022 aa17.81■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Gm973E9Q295 1059 aa17.8■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Cfap73J3QPZ5 306 aa17.8■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Trim30aP15533 496 aa17.8■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Bms1Q6PGF5 1284 aaKnown RBP17.8■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Sv2bQ8BG39 683 aa17.8■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Ppp1r42Q8R1Z4 357 aa17.8■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Ccdc178Q8CDV0 866 aa17.8■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Gpatch11Q3UFS4 262 aa17.79■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Sass6Q80UK7 654 aa17.79■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Noc3lQ8VI84 807 aaKnown RBP17.79■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Mmp8O70138 465 aa17.79■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Mcm3P25206 812 aaKnown RBP17.79■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Kcnf1Q7TSH7 493 aa17.79■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 NpatQ8BMA5 1420 aa17.79■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 MpripP97434 1024 aa17.78■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Adam1bQ8R534 806 aa17.78■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Stx6Q9JKK1 255 aa17.78■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Plekhg1F6S200 1446 aa17.78■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Ms4a2P20490 235 aa17.78■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Oxsr1Q6P9R2 527 aa17.78■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Znf316Q6PGE4 1016 aa17.78■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Tpm3P21107 285 aaKnown RBP17.77■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Nxf2Q4ZGD8 691 aa17.77■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Frmpd2A0A140LI67 1392 aa17.77■□□□□ 0.44
Ushbp1-201ENSMUST00000049184 Ccdc162pQ0VG85 912 aa17.77■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Ggnbp2Q5SV77 696 aa17.77■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Tbc1d8Q9Z1A9 1134 aa17.77■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Adgrb1Q3UHD1 1582 aa17.76■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Dync1i1O88485 628 aa17.76■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Sf3a1Q8K4Z5 791 aaKnown RBP17.76■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Eif4a2P10630 407 aa17.76■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Kiaa0754Q69ZZ9 979 aa17.76■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 BccipQ9CWI3 316 aa17.76■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 TimelessQ9R1X4 1197 aa17.76■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Cspp1B2RX88 1205 aa17.75■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 U2af2P26369 475 aaKnown RBP17.75■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Atp8b2P98199 1209 aa17.75■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Zfp804bA0A0G2JGH6 1343 aa17.75■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Qser1A2BIE1 1698 aa17.75■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 EappQ5BU09 281 aa17.74■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Pof1bQ8K4L4 587 aa17.74■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Smc3Q9CW03 1217 aaKnown RBP17.74■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Tpx2A2APB8 745 aaKnown RBP17.74■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Hoxb7P09024 217 aa17.74■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Snx13Q6PHS6 957 aa17.74■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 DpydQ8CHR6 1025 aa17.74■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Adamts7Q68SA9 1657 aa17.74■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Klhl34A2AI76 644 aa17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Tpd52l1O54818 204 aa17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 CebpzP53569 1052 aaKnown RBP17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Gjb2Q00977 226 aa17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Wdr24Q8CFJ9 790 aa17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Mcmdc2E9Q956 681 aa17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Cwc27Q3TKY6 469 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms