RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 PdcQ9QW08 244 aa18.09■□□□□ 0.49
Usp38-201ENSMUST00000042724 Irgm2A0A140LIF8 407 aa18.09■□□□□ 0.49
Usp38-201ENSMUST00000042724 Tom1O88746 492 aa18.09■□□□□ 0.49
Usp38-201ENSMUST00000042724 ImmtQ8CAQ8 757 aaKnown RBP18.08■□□□□ 0.49
Usp38-201ENSMUST00000042724 TbcaP48428 108 aaKnown RBP18.08■□□□□ 0.49
Usp38-201ENSMUST00000042724 Lrrcc1Q69ZB0 1026 aa18.08■□□□□ 0.49
Usp38-201ENSMUST00000042724 Tpm4Q6IRU2 248 aa18.08■□□□□ 0.49
Usp38-201ENSMUST00000042724 Ssh1Q76I79 1042 aa18.08■□□□□ 0.49
Usp38-201ENSMUST00000042724 Krt84Q99M73 603 aa18.08■□□□□ 0.49
Usp38-201ENSMUST00000042724 Vamp4O70480 141 aa18.08■□□□□ 0.48
Usp38-201ENSMUST00000042724 Rad17Q6NXW6 688 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Wdr63B2RY71 923 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Rbm27Q5SFM8 1060 aaKnown RBP18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Kiaa0753Q6A000 959 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Cep57l1Q8VDS7 400 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Ankrd50F7BE84 1390 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Babam1Q3UI43 333 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Hmgb2P30681 210 aaKnown RBP18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Fbln2P37889 1221 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Zap70P43404 618 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Bcar3Q9QZK2 820 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Cep170Q6A065 1588 aa18.07■□□□□ 0.48
Usp38-201ENSMUST00000042724 Isy1Q69ZQ2 285 aaKnown RBP18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 Taf7Q9R1C0 341 aa18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 Hoxc9P09633 260 aa18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 Tbc1d9Q3UYK3 1264 aa18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 EappQ5BU09 281 aa18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 AidaQ8C4Q6 305 aa18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 Anapc15-psA0A140T8L6 141 aa18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 Fsd1Q7TPM6 496 aa18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 Ppp1r9bQ6R891 817 aaKnown RBP18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 Ipo7Q9EPL8 1038 aaKnown RBP18.06■□□□□ 0.48
Usp38-201ENSMUST00000042724 Cwc25Q9DBF7 416 aa18.05■□□□□ 0.48
Usp38-201ENSMUST00000042724 Gtf2f1Q3THK3 508 aaKnown RBP18.05■□□□□ 0.48
Usp38-201ENSMUST00000042724 Spty2d1Q68FG3 682 aa18.05■□□□□ 0.48
Usp38-201ENSMUST00000042724 Fsd2Q8BZ52 692 aa18.05■□□□□ 0.48
Usp38-201ENSMUST00000042724 Stk38Q91VJ4 465 aa18.05■□□□□ 0.48
Usp38-201ENSMUST00000042724 Fam13aQ8BGI4 693 aa18.04■□□□□ 0.48
Usp38-201ENSMUST00000042724 GckrQ91X44 587 aa18.04■□□□□ 0.48
Usp38-201ENSMUST00000042724 PtprtQ99M80 1454 aa18.04■□□□□ 0.48
Usp38-201ENSMUST00000042724 Slf2Q6P9P0 1278 aa18.04■□□□□ 0.48
Usp38-201ENSMUST00000042724 Dnmt1P13864 1620 aaKnown RBP18.04■□□□□ 0.48
Usp38-201ENSMUST00000042724 Ppp6r1Q7TSI3 856 aa18.04■□□□□ 0.48
Usp38-201ENSMUST00000042724 Cfap69Q8BH53 942 aa18.04■□□□□ 0.48
Usp38-201ENSMUST00000042724 Plxnc1Q9QZC2 1574 aa18.03■□□□□ 0.48
Usp38-201ENSMUST00000042724 Cnnm3Q32NY4 713 aa18.03■□□□□ 0.48
Usp38-201ENSMUST00000042724 Cfap65Q3V0B4 1847 aa18.03■□□□□ 0.48
Usp38-201ENSMUST00000042724 Trim27Q62158 513 aa18.03■□□□□ 0.48
Usp38-201ENSMUST00000042724 EzrP26040 586 aaKnown RBP18.03■□□□□ 0.48
Usp38-201ENSMUST00000042724 Nlgn1Q99K10 843 aa18.03■□□□□ 0.48
Usp38-201ENSMUST00000042724 Efcab2Q9CQ46 164 aa18.03■□□□□ 0.48
Usp38-201ENSMUST00000042724 Mroh2aD3Z750 1679 aa18.02■□□□□ 0.48
Usp38-201ENSMUST00000042724 Prim1P20664 417 aa18.02■□□□□ 0.48
Usp38-201ENSMUST00000042724 Lamc1P02468 1607 aaKnown RBP18.02■□□□□ 0.48
Usp38-201ENSMUST00000042724 Depdc5P61460 1591 aa18.02■□□□□ 0.48
Usp38-201ENSMUST00000042724 Tex14Q7M6U3 1450 aa18.02■□□□□ 0.48
Usp38-201ENSMUST00000042724 AU022751B1B0V2 589 aa18.02■□□□□ 0.47
Usp38-201ENSMUST00000042724 Cdkl5Q3UTQ8 938 aa18.02■□□□□ 0.47
Usp38-201ENSMUST00000042724 Mctp2Q5RJH2 878 aa18.02■□□□□ 0.47
Usp38-201ENSMUST00000042724 Scaf1Q5U4C3 1256 aaKnown RBP18.02■□□□□ 0.47
Usp38-201ENSMUST00000042724 Liat1Q810M6 228 aa18.02■□□□□ 0.47
Usp38-201ENSMUST00000042724 Gjb2Q00977 226 aa18.01■□□□□ 0.47
Usp38-201ENSMUST00000042724 Pms1Q8K119 917 aa18.01■□□□□ 0.47
Usp38-201ENSMUST00000042724 Tmc1Q8R4P5 757 aa18.01■□□□□ 0.47
Usp38-201ENSMUST00000042724 Slain2Q8CI08 581 aa18.01■□□□□ 0.47
Usp38-201ENSMUST00000042724 ThemisQ8BGW0 636 aa18.01■□□□□ 0.47
Usp38-201ENSMUST00000042724 Fhod3Q76LL6 1578 aa18.01■□□□□ 0.47
Usp38-201ENSMUST00000042724 Znf335A2A5K6 1337 aa18.01■□□□□ 0.47
Usp38-201ENSMUST00000042724 Wdhd1P59328 1117 aa18.01■□□□□ 0.47
Usp38-201ENSMUST00000042724 Kif14L0N7N1 1674 aaKnown RBP18.01■□□□□ 0.47
Usp38-201ENSMUST00000042724 Kdm2bQ6P1G2 1309 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Nsfl1cQ9CZ44 370 aaKnown RBP18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Cdc45Q9Z1X9 566 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Fam135bQ9DAI6 1403 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Kif21bQ9QXL1 1668 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 LifrP42703 1092 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Idi1P58044 227 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Krt85Q9Z2T6 507 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Gas2l2Q5SSG4 860 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Tarbp1E9Q368 1579 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Tbc1d32Q3URV1 1296 aa18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Ccnl1Q52KE7 532 aaKnown RBP18■□□□□ 0.47
Usp38-201ENSMUST00000042724 Atp10aO54827 1508 aa17.99■□□□□ 0.47
Usp38-201ENSMUST00000042724 Cadps2Q8BYR5 1297 aa17.99■□□□□ 0.47
Usp38-201ENSMUST00000042724 Nos1Q9Z0J4 1429 aa17.99■□□□□ 0.47
Usp38-201ENSMUST00000042724 Rnf17Q99MV7 1640 aa17.99■□□□□ 0.47
Usp38-201ENSMUST00000042724 Nip7Q9CXK8 180 aaKnown RBP17.99■□□□□ 0.47
Usp38-201ENSMUST00000042724 Plekhg1F6S200 1446 aa17.99■□□□□ 0.47
Usp38-201ENSMUST00000042724 Dnajc2P54103 621 aaKnown RBP17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Slc7a3P70423 618 aa17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Ifit1bl2Q3U687 466 aa17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Ncbp1Q3UYV9 790 aaKnown RBP17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Cep131Q62036 1060 aa17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Ncbp3Q8BZR9 615 aaKnown RBP17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Klf15Q9EPW2 415 aa17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Yeats2Q3TUF7 1407 aa17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Pof1bQ8K4L4 587 aa17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Scaf11E9PZM7 1456 aaKnown RBP17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 Atp8b2P98199 1209 aa17.98■□□□□ 0.47
Usp38-201ENSMUST00000042724 VeztQ3ZK22 780 aa17.98■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms