RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Pik3c2bE9QAN8 1632 aa19.72■□□□□ 0.75
Trim28-201ENSMUST00000005705 Ptpdc1Q6NZK8 747 aa19.71■□□□□ 0.75
Trim28-201ENSMUST00000005705 Cyp27a1Q9DBG1 533 aa19.71■□□□□ 0.75
Trim28-201ENSMUST00000005705 Cfdp1O88271 295 aaKnown RBP19.71■□□□□ 0.75
Trim28-201ENSMUST00000005705 Gemin5Q8BX17 1502 aaKnown RBP19.71■□□□□ 0.75
Trim28-201ENSMUST00000005705 Dip2bQ3UH60 1574 aa19.7■□□□□ 0.74
Trim28-201ENSMUST00000005705 Usp32F8VPZ3 1604 aa19.7■□□□□ 0.74
Trim28-201ENSMUST00000005705 Becn1O88597 448 aa19.7■□□□□ 0.74
Trim28-201ENSMUST00000005705 Zdhhc9P59268 364 aa19.7■□□□□ 0.74
Trim28-201ENSMUST00000005705 Samd1D3YXK1 519 aa19.7■□□□□ 0.74
Trim28-201ENSMUST00000005705 Zap70P43404 618 aa19.7■□□□□ 0.74
Trim28-201ENSMUST00000005705 Nphp1Q9QY53 687 aa19.7■□□□□ 0.74
Trim28-201ENSMUST00000005705 Znf541Q0GGX2 1363 aa19.69■□□□□ 0.74
Trim28-201ENSMUST00000005705 Zkscan16A2ALW2 728 aa19.69■□□□□ 0.74
Trim28-201ENSMUST00000005705 Gzf1Q4VBD9 706 aa19.69■□□□□ 0.74
Trim28-201ENSMUST00000005705 Edc3Q8K2D3 508 aaKnown RBP19.69■□□□□ 0.74
Trim28-201ENSMUST00000005705 Pof1bQ8K4L4 587 aa19.69■□□□□ 0.74
Trim28-201ENSMUST00000005705 FosbP13346 338 aa19.68■□□□□ 0.74
Trim28-201ENSMUST00000005705 RestQ8VIG1 1082 aa19.68■□□□□ 0.74
Trim28-201ENSMUST00000005705 Gm10563F6WIE4 79 aa19.68■□□□□ 0.74
Trim28-201ENSMUST00000005705 Hoxb7P09024 217 aa19.68■□□□□ 0.74
Trim28-201ENSMUST00000005705 Tpx2A2APB8 745 aaKnown RBP19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 Gnai2P08752 355 aaKnown RBP19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 Pa2g4P50580 394 aaKnown RBP19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 EvcP57680 1005 aa19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 Erc2Q6PH08 957 aa19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 Rcan3Q9JKK0 239 aa19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 PzpQ61838 1495 aa19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 ImpactO55091 318 aa19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 Tlr7P58681 1050 aa19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 Gcc1Q9D4H2 778 aa19.67■□□□□ 0.74
Trim28-201ENSMUST00000005705 Gripap1Q8VD04 806 aa19.66■□□□□ 0.74
Trim28-201ENSMUST00000005705 Cyp2d12Q8BVD2 504 aa19.66■□□□□ 0.74
Trim28-201ENSMUST00000005705 Mknk2Q8CDB0 459 aa19.66■□□□□ 0.74
Trim28-201ENSMUST00000005705 Ncapd2Q8K2Z4 1392 aa19.66■□□□□ 0.74
Trim28-201ENSMUST00000005705 MarsQ68FL6 902 aaKnown RBP19.66■□□□□ 0.74
Trim28-201ENSMUST00000005705 Ccdc155Q80VJ8 648 aa19.66■□□□□ 0.74
Trim28-201ENSMUST00000005705 Ap3b2Q9JME5 1082 aa19.66■□□□□ 0.74
Trim28-201ENSMUST00000005705 Anapc15-psA0A140T8L6 141 aa19.65■□□□□ 0.74
Trim28-201ENSMUST00000005705 Polr3gQ6NXY9 223 aa19.65■□□□□ 0.74
Trim28-201ENSMUST00000005705 NexnQ7TPW1 607 aa19.65■□□□□ 0.74
Trim28-201ENSMUST00000005705 Mphosph10Q810V0 681 aaKnown RBP19.65■□□□□ 0.74
Trim28-201ENSMUST00000005705 EspnlQ3UYR4 1005 aa19.65■□□□□ 0.74
Trim28-201ENSMUST00000005705 Usp48Q3V0C5 1052 aa19.65■□□□□ 0.74
Trim28-201ENSMUST00000005705 Fez1Q8K0X8 392 aa19.65■□□□□ 0.74
Trim28-201ENSMUST00000005705 Sos1Q62245 1319 aa19.65■□□□□ 0.74
Trim28-201ENSMUST00000005705 Zscan25B2RX31 543 aa19.64■□□□□ 0.74
Trim28-201ENSMUST00000005705 Chl1P70232 1209 aa19.64■□□□□ 0.74
Trim28-201ENSMUST00000005705 Chd1lQ9CXF7 900 aa19.64■□□□□ 0.73
Trim28-201ENSMUST00000005705 Spef2Q8C9J3 1734 aa19.64■□□□□ 0.73
Trim28-201ENSMUST00000005705 Hspa2P17156 633 aa19.64■□□□□ 0.73
Trim28-201ENSMUST00000005705 CgnP59242 1191 aa19.64■□□□□ 0.73
Trim28-201ENSMUST00000005705 Tex2Q6ZPJ0 1128 aaKnown RBP19.64■□□□□ 0.73
Trim28-201ENSMUST00000005705 Aldh8a1Q8BH00 487 aa19.64■□□□□ 0.73
Trim28-201ENSMUST00000005705 Mlh1Q9JK91 760 aa19.64■□□□□ 0.73
Trim28-201ENSMUST00000005705 Astn2Q80Z10 1352 aa19.63■□□□□ 0.73
Trim28-201ENSMUST00000005705 Kif1aP33173 1695 aa19.63■□□□□ 0.73
Trim28-201ENSMUST00000005705 Arhgef1Q61210 920 aaKnown RBP19.63■□□□□ 0.73
Trim28-201ENSMUST00000005705 Nlgn1Q99K10 843 aa19.63■□□□□ 0.73
Trim28-201ENSMUST00000005705 Slx4ipQ9D7Y9 413 aa19.63■□□□□ 0.73
Trim28-201ENSMUST00000005705 Tnnt2P50752 301 aa19.63■□□□□ 0.73
Trim28-201ENSMUST00000005705 Gpatch11Q3UFS4 262 aa19.63■□□□□ 0.73
Trim28-201ENSMUST00000005705 Olfml1Q8BSH2 233 aa19.63■□□□□ 0.73
Trim28-201ENSMUST00000005705 FancaQ9JL70 1439 aa19.62■□□□□ 0.73
Trim28-201ENSMUST00000005705 Kif4P33174 1231 aa19.62■□□□□ 0.73
Trim28-201ENSMUST00000005705 Filip1lQ6P6L0 1131 aa19.62■□□□□ 0.73
Trim28-201ENSMUST00000005705 Parp14Q2EMV9 1817 aa19.62■□□□□ 0.73
Trim28-201ENSMUST00000005705 Tnrc6bQ8BKI2 1810 aaKnown RBP19.61■□□□□ 0.73
Trim28-201ENSMUST00000005705 Tmem94Q7TSH8 1360 aa19.61■□□□□ 0.73
Trim28-201ENSMUST00000005705 Mad1l1Q9WTX8 717 aaKnown RBP19.6■□□□□ 0.73
Trim28-201ENSMUST00000005705 Cps1Q8C196 1500 aa19.6■□□□□ 0.73
Trim28-201ENSMUST00000005705 Cavin2Q63918 418 aaKnown RBP19.6■□□□□ 0.73
Trim28-201ENSMUST00000005705 Gse1Q3U3C9 1213 aa19.59■□□□□ 0.73
Trim28-201ENSMUST00000005705 Mcm3P25206 812 aaKnown RBP19.59■□□□□ 0.73
Trim28-201ENSMUST00000005705 Frmpd2A0A140LI67 1392 aa19.59■□□□□ 0.73
Trim28-201ENSMUST00000005705 Kif20bQ80WE4 1774 aaKnown RBP19.59■□□□□ 0.73
Trim28-201ENSMUST00000005705 Tm6sf1P58749 370 aa19.59■□□□□ 0.73
Trim28-201ENSMUST00000005705 Casc1Q6TDU8 730 aa19.58■□□□□ 0.72
Trim28-201ENSMUST00000005705 Serpina10Q8R121 448 aa19.58■□□□□ 0.72
Trim28-201ENSMUST00000005705 Dhx30Q99PU8 1217 aaKnown RBP19.58■□□□□ 0.72
Trim28-201ENSMUST00000005705 Zkscan2G3X952 960 aa19.57■□□□□ 0.72
Trim28-201ENSMUST00000005705 Ercc3P49135 783 aa19.57■□□□□ 0.72
Trim28-201ENSMUST00000005705 Mcm2P97310 904 aa19.57■□□□□ 0.72
Trim28-201ENSMUST00000005705 Pnma3Q8JZW8 466 aa19.57■□□□□ 0.72
Trim28-201ENSMUST00000005705 Ets1P27577 440 aa19.56■□□□□ 0.72
Trim28-201ENSMUST00000005705 Fbxo2Q80UW2 297 aa19.56■□□□□ 0.72
Trim28-201ENSMUST00000005705 Samm50Q8BGH2 469 aa19.56■□□□□ 0.72
Trim28-201ENSMUST00000005705 Slit3Q9WVB4 1523 aa19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 Mum1Q6DID5 682 aa19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 Tceal9Q9DD24 104 aa19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 St18Q80TY4 1045 aa19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 Brf1Q8CFK2 676 aa19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 Rreb1Q3UH06 1700 aaKnown RBP19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 Cyp2d11P24457 504 aa19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 Ddx17Q501J6 650 aaKnown RBP19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 Tsr2Q8C8T8 191 aa19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 Il1rapl2Q9ERS6 686 aa19.55■□□□□ 0.72
Trim28-201ENSMUST00000005705 Gys2Q8VCB3 704 aa19.54■□□□□ 0.72
Trim28-201ENSMUST00000005705 Sirt1Q923E4 737 aa19.54■□□□□ 0.72
Trim28-201ENSMUST00000005705 Chd2E9PZM4 1827 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms