Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RNU6-904P-201ENST00000516206 101 ntBASIC-3.27□□□□□ -2.93
COL6A5A8TX70 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.27□□□□□ -2.93
COL6A5A8TX70 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.28□□□□□ -2.93
COL6A5A8TX70 RNU6-1289P-201ENST00000384431 106 ntBASIC-3.28□□□□□ -2.93
COL6A5A8TX70 Y_RNA.530-201ENST00000384587 101 ntBASIC-3.28□□□□□ -2.93
COL6A5A8TX70 RNU6-1088P-201ENST00000516850 104 ntBASIC-3.28□□□□□ -2.93
COL6A5A8TX70 AL121895.2-201ENST00000619558 447 ntBASIC-3.28□□□□□ -2.94
COL6A5A8TX70 AC006160.2-201ENST00000637708 154 ntBASIC-3.28□□□□□ -2.94
COL6A5A8TX70 RNU6-380P-201ENST00000410207 107 ntBASIC-3.29□□□□□ -2.94
COL6A5A8TX70 MTND5P5-201ENST00000503764 376 ntBASIC-3.29□□□□□ -2.94
COL6A5A8TX70 SNORD116.1-201ENST00000365628 92 ntBASIC-3.29□□□□□ -2.94
COL6A5A8TX70 RNU6-460P-201ENST00000391158 108 ntBASIC-3.29□□□□□ -2.94
COL6A5A8TX70 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-3.3□□□□□ -2.94
COL6A5A8TX70 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.31□□□□□ -2.94
COL6A5A8TX70 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.31□□□□□ -2.94
COL6A5A8TX70 RNU6-930P-201ENST00000390938 100 ntBASIC-3.31□□□□□ -2.94
COL6A5A8TX70 SNORD37.2-201ENST00000391075 66 ntBASIC-3.31□□□□□ -2.94
COL6A5A8TX70 SNORA40.3-201ENST00000390964 122 ntBASIC-3.32□□□□□ -2.94
COL6A5A8TX70 U7.3-201ENST00000616123 62 ntBASIC-3.32□□□□□ -2.94
COL6A5A8TX70 RNY3P15-201ENST00000516297 97 ntBASIC-3.32□□□□□ -2.94
COL6A5A8TX70 MIR3913-1-201ENST00000577744 102 ntBASIC-3.32□□□□□ -2.94
COL6A5A8TX70 RNU6-797P-201ENST00000363101 109 ntBASIC-3.33□□□□□ -2.94
COL6A5A8TX70 Y_RNA.337-201ENST00000365312 102 ntBASIC-3.33□□□□□ -2.94
COL6A5A8TX70 MTND3P10-201ENST00000450967 341 ntBASIC-3.33□□□□□ -2.94
COL6A5A8TX70 AC078883.4-201ENST00000623218 367 ntBASIC-3.33□□□□□ -2.94
COL6A5A8TX70 RNU6-883P-201ENST00000384597 107 ntBASIC-3.33□□□□□ -2.94
COL6A5A8TX70 RNU6-959P-201ENST00000384671 107 ntBASIC-3.33□□□□□ -2.94
COL6A5A8TX70 AC110620.1-201ENST00000416042 228 ntBASIC-3.33□□□□□ -2.94
COL6A5A8TX70 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.34□□□□□ -2.94
COL6A5A8TX70 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-3.34□□□□□ -2.94
COL6A5A8TX70 AC114801.3-201ENST00000510231 177 ntBASIC-3.34□□□□□ -2.94
COL6A5A8TX70 RNU6-931P-201ENST00000363850 107 ntBASIC-3.34□□□□□ -2.94
COL6A5A8TX70 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.34□□□□□ -2.94
COL6A5A8TX70 MIR548F5-201ENST00000408421 86 ntBASIC-3.34□□□□□ -2.94
COL6A5A8TX70 MIR548F3-201ENST00000408509 87 ntBASIC-3.34□□□□□ -2.94
COL6A5A8TX70 AC099799.1-201ENST00000439809 192 ntBASIC-3.34□□□□□ -2.94
COL6A5A8TX70 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-3.34□□□□□ -2.94
COL6A5A8TX70 MIR4272-201ENST00000635924 64 ntBASIC-3.34□□□□□ -2.94
COL6A5A8TX70 Y_RNA.154-201ENST00000363624 102 ntBASIC-3.35□□□□□ -2.95
COL6A5A8TX70 RNU6-890P-201ENST00000384121 107 ntBASIC-3.35□□□□□ -2.95
COL6A5A8TX70 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.35□□□□□ -2.95
COL6A5A8TX70 SNORD33.1-201ENST00000516213 88 ntBASIC-3.35□□□□□ -2.95
COL6A5A8TX70 RNU6-315P-201ENST00000362666 107 ntBASIC-3.36□□□□□ -2.95
COL6A5A8TX70 SNORD127-201ENST00000458892 86 ntBASIC-3.36□□□□□ -2.95
COL6A5A8TX70 RNU7-121P-201ENST00000516604 62 ntBASIC-3.36□□□□□ -2.95
COL6A5A8TX70 RPS29P30-201ENST00000600975 111 ntBASIC-3.36□□□□□ -2.95
COL6A5A8TX70 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.36□□□□□ -2.95
COL6A5A8TX70 Y_RNA.339-201ENST00000365325 102 ntBASIC-3.36□□□□□ -2.95
COL6A5A8TX70 RNU6-687P-201ENST00000516443 89 ntBASIC-3.36□□□□□ -2.95
COL6A5A8TX70 MIR4999-201ENST00000585029 91 ntBASIC-3.36□□□□□ -2.95
COL6A5A8TX70 SNORA25.4-201ENST00000363666 124 ntBASIC-3.37□□□□□ -2.95
COL6A5A8TX70 MIR1302-5-201ENST00000408164 150 ntBASIC-3.37□□□□□ -2.95
COL6A5A8TX70 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-3.38□□□□□ -2.95
COL6A5A8TX70 AC103706.3-201ENST00000636297 85 ntBASIC-3.38□□□□□ -2.95
COL6A5A8TX70 MTND2P30-201ENST00000456663 382 ntBASIC-3.39□□□□□ -2.95
COL6A5A8TX70 SNORD58B-201ENST00000607313 66 ntBASIC-3.39□□□□□ -2.95
COL6A5A8TX70 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-3.39□□□□□ -2.95
COL6A5A8TX70 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.39□□□□□ -2.95
COL6A5A8TX70 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.4□□□□□ -2.95
COL6A5A8TX70 U2.14-201ENST00000615943 113 ntBASIC-3.4□□□□□ -2.95
COL6A5A8TX70 RNU6-497P-201ENST00000365316 104 ntBASIC-3.4□□□□□ -2.95
COL6A5A8TX70 SNORD116-22-201ENST00000384430 92 ntBASIC-3.4□□□□□ -2.95
COL6A5A8TX70 RNU6-121P-201ENST00000410525 99 ntBASIC-3.4□□□□□ -2.95
COL6A5A8TX70 Y_RNA.292-201ENST00000364904 97 ntBASIC-3.41□□□□□ -2.96
COL6A5A8TX70 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.41□□□□□ -2.96
COL6A5A8TX70 RNU6-1257P-201ENST00000384625 110 ntBASIC-3.41□□□□□ -2.96
COL6A5A8TX70 AL158147.1-201ENST00000443970 75 ntBASIC-3.41□□□□□ -2.96
COL6A5A8TX70 RNU6-835P-201ENST00000516974 104 ntBASIC-3.41□□□□□ -2.96
COL6A5A8TX70 RNU6-463P-201ENST00000384340 107 ntBASIC-3.42□□□□□ -2.96
COL6A5A8TX70 SNORA19-201ENST00000384737 128 ntBASIC-3.42□□□□□ -2.96
COL6A5A8TX70 Y_RNA.201-201ENST00000364052 96 ntBASIC-3.42□□□□□ -2.96
COL6A5A8TX70 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.43□□□□□ -2.96
COL6A5A8TX70 SNORA40.14-201ENST00000516543 86 ntBASIC-3.43□□□□□ -2.96
COL6A5A8TX70 AC072026.1-201ENST00000605023 201 ntBASIC-3.43□□□□□ -2.96
COL6A5A8TX70 AC104985.2-201ENST00000620598 500 ntBASIC-3.43□□□□□ -2.96
COL6A5A8TX70 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.44□□□□□ -2.96
COL6A5A8TX70 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.44□□□□□ -2.96
COL6A5A8TX70 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-3.44□□□□□ -2.96
COL6A5A8TX70 MIR3134-201ENST00000579433 74 ntBASIC-3.45□□□□□ -2.96
COL6A5A8TX70 SNORA40.4-201ENST00000390971 128 ntBASIC-3.45□□□□□ -2.96
COL6A5A8TX70 RNY3P16-201ENST00000516338 101 ntBASIC-3.45□□□□□ -2.96
COL6A5A8TX70 MIR4679-1-201ENST00000637619 75 ntBASIC-3.45□□□□□ -2.96
COL6A5A8TX70 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.47□□□□□ -2.96
COL6A5A8TX70 RNU6-239P-201ENST00000390990 99 ntBASIC-3.47□□□□□ -2.96
COL6A5A8TX70 Y_RNA.661-201ENST00000516003 99 ntBASIC-3.47□□□□□ -2.96
COL6A5A8TX70 U7.2-201ENST00000607576 63 ntBASIC-3.47□□□□□ -2.96
COL6A5A8TX70 MIR4282-201ENST00000583613 67 ntBASIC-3.47□□□□□ -2.97
COL6A5A8TX70 NBR2-204ENST00000587322 63 ntBASIC-3.47□□□□□ -2.97
COL6A5A8TX70 MIR548BB-201ENST00000626714 66 ntBASIC-3.47□□□□□ -2.97
COL6A5A8TX70 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.48□□□□□ -2.97
COL6A5A8TX70 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.48□□□□□ -2.97
COL6A5A8TX70 MIR2052-201ENST00000636055 55 ntBASIC-3.48□□□□□ -2.97
COL6A5A8TX70 RNU6-1188P-201ENST00000363795 107 ntBASIC-3.48□□□□□ -2.97
COL6A5A8TX70 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.48□□□□□ -2.97
COL6A5A8TX70 AP001340.1-201ENST00000624405 217 ntBASIC-3.49□□□□□ -2.97
COL6A5A8TX70 RNU6-500P-201ENST00000362349 107 ntBASIC-3.49□□□□□ -2.97
COL6A5A8TX70 SNORA63.7-201ENST00000365579 123 ntBASIC-3.49□□□□□ -2.97
COL6A5A8TX70 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.49□□□□□ -2.97
COL6A5A8TX70 SNORD58C-201ENST00000365223 64 ntBASIC-3.5□□□□□ -2.97
COL6A5A8TX70 AC090582.1-201ENST00000636321 199 ntBASIC-3.5□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms