Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.23□□□□□ -2.77
PRKDCP78527 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 RNU6-520P-201ENST00000384717 104 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 MIR519C-201ENST00000385053 87 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 MIR1263-201ENST00000408324 86 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 RNU6-916P-201ENST00000516088 109 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 RNU7-153P-201ENST00000516455 62 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 RNU6-506P-201ENST00000516553 94 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 RNY4P14-201ENST00000363656 96 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 RNU6-867P-201ENST00000364956 107 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.23□□□□□ -2.77
PRKDCP78527 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.24□□□□□ -2.77
PRKDCP78527 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.24□□□□□ -2.77
PRKDCP78527 SNORD45.1-201ENST00000363181 77 ntBASIC-2.24□□□□□ -2.77
PRKDCP78527 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.24□□□□□ -2.77
PRKDCP78527 SNORA41B-201ENST00000384785 128 ntBASIC-2.24□□□□□ -2.77
PRKDCP78527 MIR4317-201ENST00000637586 65 ntBASIC-2.24□□□□□ -2.77
PRKDCP78527 RNU6-172P-201ENST00000411000 93 ntBASIC-2.25□□□□□ -2.77
PRKDCP78527 RNY3P16-201ENST00000516338 101 ntBASIC-2.25□□□□□ -2.77
PRKDCP78527 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.25□□□□□ -2.77
PRKDCP78527 MIR620-201ENST00000385232 95 ntBASIC-2.25□□□□□ -2.77
PRKDCP78527 MIR3613-201ENST00000579844 87 ntBASIC-2.25□□□□□ -2.77
PRKDCP78527 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.25□□□□□ -2.77
PRKDCP78527 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.25□□□□□ -2.77
PRKDCP78527 MIR7978-201ENST00000636158 59 ntBASIC-2.25□□□□□ -2.77
PRKDCP78527 AC090582.1-201ENST00000636321 199 ntBASIC-2.25□□□□□ -2.77
PRKDCP78527 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.26□□□□□ -2.77
PRKDCP78527 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.26□□□□□ -2.77
PRKDCP78527 U4.5-201ENST00000617137 123 ntBASIC-2.26□□□□□ -2.77
PRKDCP78527 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.26□□□□□ -2.77
PRKDCP78527 RNU6-686P-201ENST00000364839 107 ntBASIC-2.26□□□□□ -2.77
PRKDCP78527 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.26□□□□□ -2.77
PRKDCP78527 MTND4P17-201ENST00000470444 350 ntBASIC-2.26□□□□□ -2.77
PRKDCP78527 RNU6-806P-201ENST00000365147 105 ntBASIC-2.27□□□□□ -2.77
PRKDCP78527 RNU6-530P-201ENST00000391180 107 ntBASIC-2.27□□□□□ -2.77
PRKDCP78527 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.27□□□□□ -2.77
PRKDCP78527 MTND4LP32-201ENST00000636111 270 ntBASIC-2.27□□□□□ -2.77
PRKDCP78527 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.27□□□□□ -2.77
PRKDCP78527 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.27□□□□□ -2.77
PRKDCP78527 RNU6-239P-201ENST00000390990 99 ntBASIC-2.28□□□□□ -2.77
PRKDCP78527 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.28□□□□□ -2.77
PRKDCP78527 AL035470.1-201ENST00000622571 220 ntBASIC-2.28□□□□□ -2.77
PRKDCP78527 U6.104-201ENST00000637979 90 ntBASIC-2.28□□□□□ -2.77
PRKDCP78527 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.28□□□□□ -2.77
PRKDCP78527 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.28□□□□□ -2.78
PRKDCP78527 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.28□□□□□ -2.78
PRKDCP78527 RNU6-460P-201ENST00000391158 108 ntBASIC-2.28□□□□□ -2.78
PRKDCP78527 MTND5P22-201ENST00000458380 195 ntBASIC-2.28□□□□□ -2.78
PRKDCP78527 RNU4-14P-201ENST00000410858 122 ntBASIC-2.29□□□□□ -2.78
PRKDCP78527 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.29□□□□□ -2.78
PRKDCP78527 RNU6-823P-201ENST00000391042 103 ntBASIC-2.29□□□□□ -2.78
PRKDCP78527 AC139453.2-201ENST00000487255 133 ntBASIC-2.29□□□□□ -2.78
PRKDCP78527 U2.14-201ENST00000615943 113 ntBASIC-2.29□□□□□ -2.78
PRKDCP78527 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.3□□□□□ -2.78
PRKDCP78527 RNU6-789P-201ENST00000517105 102 ntBASIC-2.3□□□□□ -2.78
PRKDCP78527 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.3□□□□□ -2.78
PRKDCP78527 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.3□□□□□ -2.78
PRKDCP78527 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.3□□□□□ -2.78
PRKDCP78527 RNU6-557P-201ENST00000516842 110 ntBASIC-2.3□□□□□ -2.78
PRKDCP78527 RNU6-68P-201ENST00000516576 104 ntBASIC-2.3□□□□□ -2.78
PRKDCP78527 AP001340.1-201ENST00000624405 217 ntBASIC-2.3□□□□□ -2.78
PRKDCP78527 MIR4426-201ENST00000640330 63 ntBASIC-2.31□□□□□ -2.78
PRKDCP78527 RNU4-11P-201ENST00000365287 132 ntBASIC-2.31□□□□□ -2.78
PRKDCP78527 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.31□□□□□ -2.78
PRKDCP78527 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.31□□□□□ -2.78
PRKDCP78527 AC072026.1-201ENST00000605023 201 ntBASIC-2.31□□□□□ -2.78
PRKDCP78527 MIR2052-201ENST00000636055 55 ntBASIC-2.31□□□□□ -2.78
PRKDCP78527 RNU6-275P-201ENST00000364910 107 ntBASIC-2.32□□□□□ -2.78
PRKDCP78527 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.32□□□□□ -2.78
PRKDCP78527 MIR1252-201ENST00000408861 65 ntBASIC-2.32□□□□□ -2.78
PRKDCP78527 RNU6-277P-201ENST00000516272 106 ntBASIC-2.32□□□□□ -2.78
PRKDCP78527 AC062037.1-201ENST00000605302 128 ntBASIC-2.32□□□□□ -2.78
PRKDCP78527 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 RNU6-604P-201ENST00000390917 100 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 RNU7-119P-201ENST00000459279 63 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 SNORD113.1-201ENST00000363280 73 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 RNU6-92P-201ENST00000605893 104 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 MIR1297-201ENST00000637311 77 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 AC093729.1-201ENST00000513074 128 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 RNU6-162P-201ENST00000516228 103 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 RNU6-267P-201ENST00000516714 103 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 RNU6-988P-201ENST00000519081 107 ntBASIC-2.33□□□□□ -2.78
PRKDCP78527 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.34□□□□□ -2.78
PRKDCP78527 MIR4282-201ENST00000583613 67 ntBASIC-2.34□□□□□ -2.78
PRKDCP78527 SNORD127-201ENST00000458892 86 ntBASIC-2.35□□□□□ -2.78
PRKDCP78527 MIR3688-2-201ENST00000636963 87 ntBASIC-2.35□□□□□ -2.78
PRKDCP78527 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.35□□□□□ -2.79
PRKDCP78527 SNORD115-45-201ENST00000391078 81 ntBASIC-2.35□□□□□ -2.79
PRKDCP78527 RNU6-810P-201ENST00000364001 107 ntBASIC-2.35□□□□□ -2.79
PRKDCP78527 MIR4643-201ENST00000577473 78 ntBASIC-2.36□□□□□ -2.79
PRKDCP78527 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.36□□□□□ -2.79
PRKDCP78527 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.36□□□□□ -2.79
PRKDCP78527 SNORA8.1-201ENST00000384250 140 ntBASIC-2.36□□□□□ -2.79
PRKDCP78527 U7.2-201ENST00000607576 63 ntBASIC-2.36□□□□□ -2.79
PRKDCP78527 MIR1277-201ENST00000408536 78 ntBASIC-2.37□□□□□ -2.79
PRKDCP78527 RNU6-542P-201ENST00000516405 103 ntBASIC-2.37□□□□□ -2.79
PRKDCP78527 SNORD60.1-201ENST00000362451 73 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms