Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MIR6509-201ENST00000614603 85 ntBASIC0.52□□□□□ -2.33
SNED1Q8TER0 RNU6-1241P-201ENST00000384536 107 ntBASIC0.51□□□□□ -2.33
SNED1Q8TER0 MIR203A-201ENST00000384836 110 ntBASIC0.51□□□□□ -2.33
SNED1Q8TER0 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
SNED1Q8TER0 SNORD42B-201ENST00000458893 67 ntBASIC0.51□□□□□ -2.33
SNED1Q8TER0 RNU6-871P-201ENST00000516122 100 ntBASIC0.51□□□□□ -2.33
SNED1Q8TER0 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
SNED1Q8TER0 MIR4802-201ENST00000581881 80 ntBASIC0.51□□□□□ -2.33
SNED1Q8TER0 MIR7107-201ENST00000611489 80 ntBASIC0.51□□□□□ -2.33
SNED1Q8TER0 RNA5SP517-201ENST00000364724 117 ntBASIC0.5□□□□□ -2.33
SNED1Q8TER0 RNU6-1039P-201ENST00000383931 107 ntBASIC0.5□□□□□ -2.33
SNED1Q8TER0 RNY1P8-201ENST00000383970 114 ntBASIC0.5□□□□□ -2.33
SNED1Q8TER0 RNU6-752P-201ENST00000516376 102 ntBASIC0.5□□□□□ -2.33
SNED1Q8TER0 AC069503.3-201ENST00000618674 145 ntBASIC0.5□□□□□ -2.33
SNED1Q8TER0 AC092634.7-201ENST00000621022 103 ntBASIC0.5□□□□□ -2.33
SNED1Q8TER0 AC073869.9-201ENST00000641610 120 ntBASIC0.5□□□□□ -2.33
SNED1Q8TER0 RNU6-260P-201ENST00000384092 107 ntBASIC0.49□□□□□ -2.33
SNED1Q8TER0 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
SNED1Q8TER0 SNORD110-201ENST00000408189 75 ntBASIC0.49□□□□□ -2.33
SNED1Q8TER0 MIR6718-201ENST00000616153 80 ntBASIC0.49□□□□□ -2.33
SNED1Q8TER0 SNORD114-4-201ENST00000363962 75 ntBASIC0.48□□□□□ -2.33
SNED1Q8TER0 RNA5SP25-201ENST00000410815 110 ntBASIC0.48□□□□□ -2.33
SNED1Q8TER0 AC006210.1-201ENST00000424882 111 ntBASIC0.48□□□□□ -2.33
SNED1Q8TER0 AC069271.1-201ENST00000445577 156 ntBASIC0.48□□□□□ -2.33
SNED1Q8TER0 RNU6-634P-201ENST00000459134 106 ntBASIC0.48□□□□□ -2.33
SNED1Q8TER0 MIR8053-201ENST00000613344 75 ntBASIC0.48□□□□□ -2.33
SNED1Q8TER0 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
SNED1Q8TER0 Z95118.1-201ENST00000421372 247 ntBASIC0.47□□□□□ -2.33
SNED1Q8TER0 AC139453.2-201ENST00000487255 133 ntBASIC0.47□□□□□ -2.33
SNED1Q8TER0 AC114801.3-201ENST00000510231 177 ntBASIC0.47□□□□□ -2.33
SNED1Q8TER0 MIR4752-201ENST00000579672 72 ntBASIC0.47□□□□□ -2.33
SNED1Q8TER0 SNORA25.18-201ENST00000607153 114 ntBASIC0.47□□□□□ -2.33
SNED1Q8TER0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
SNED1Q8TER0 SNORD115-22-201ENST00000364456 82 ntBASIC0.47□□□□□ -2.33
SNED1Q8TER0 SNORD30.1-201ENST00000391309 70 ntBASIC0.47□□□□□ -2.33
SNED1Q8TER0 SNORD118-201ENST00000363593 134 ntBASIC0.46□□□□□ -2.34
SNED1Q8TER0 SNORD115-31-201ENST00000365318 82 ntBASIC0.46□□□□□ -2.34
SNED1Q8TER0 RNU6-895P-201ENST00000384125 103 ntBASIC0.46□□□□□ -2.34
SNED1Q8TER0 SNORD45A-201ENST00000384512 84 ntBASIC0.46□□□□□ -2.34
SNED1Q8TER0 SNORA40.8-201ENST00000411034 126 ntBASIC0.46□□□□□ -2.34
SNED1Q8TER0 MIR3657-201ENST00000584818 117 ntBASIC0.46□□□□□ -2.34
SNED1Q8TER0 SNORA70.25-201ENST00000612741 95 ntBASIC0.46□□□□□ -2.34
SNED1Q8TER0 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
SNED1Q8TER0 uc_338.10-201ENST00000621872 182 ntBASIC0.46□□□□□ -2.34
SNED1Q8TER0 Y_RNA.407-201ENST00000383986 113 ntBASIC0.45□□□□□ -2.34
SNED1Q8TER0 RNU6-649P-201ENST00000384463 107 ntBASIC0.45□□□□□ -2.34
SNED1Q8TER0 RNU6-30P-201ENST00000384561 107 ntBASIC0.45□□□□□ -2.34
SNED1Q8TER0 RNU6-540P-201ENST00000384622 101 ntBASIC0.45□□□□□ -2.34
SNED1Q8TER0 RNU6-604P-201ENST00000390917 100 ntBASIC0.45□□□□□ -2.34
SNED1Q8TER0 SNORD71-201ENST00000411292 86 ntBASIC0.45□□□□□ -2.34
SNED1Q8TER0 MIR5706-201ENST00000579841 80 ntBASIC0.45□□□□□ -2.34
SNED1Q8TER0 MIR4473-201ENST00000583731 91 ntBASIC0.45□□□□□ -2.34
SNED1Q8TER0 SNORD113.1-201ENST00000363280 73 ntBASIC0.44□□□□□ -2.34
SNED1Q8TER0 RNU6-990P-201ENST00000364385 104 ntBASIC0.44□□□□□ -2.34
SNED1Q8TER0 SNORA2A-201ENST00000383885 135 ntBASIC0.44□□□□□ -2.34
SNED1Q8TER0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.44□□□□□ -2.34
SNED1Q8TER0 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
SNED1Q8TER0 MIR652-201ENST00000385278 98 ntBASIC0.44□□□□□ -2.34
SNED1Q8TER0 RNA5SP147-201ENST00000516493 109 ntBASIC0.44□□□□□ -2.34
SNED1Q8TER0 RNU6-881P-201ENST00000516813 102 ntBASIC0.44□□□□□ -2.34
SNED1Q8TER0 RNU6-663P-201ENST00000391105 106 ntBASIC0.43□□□□□ -2.34
SNED1Q8TER0 RNA5SP299-201ENST00000391203 116 ntBASIC0.43□□□□□ -2.34
SNED1Q8TER0 RNU6-1216P-201ENST00000362590 107 ntBASIC0.42□□□□□ -2.34
SNED1Q8TER0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.42□□□□□ -2.34
SNED1Q8TER0 SCARNA17.3-201ENST00000516381 125 ntBASIC0.42□□□□□ -2.34
SNED1Q8TER0 MIR548AE1-201ENST00000583292 70 ntBASIC0.42□□□□□ -2.34
SNED1Q8TER0 SNORA2.1-201ENST00000363089 137 ntBASIC0.41□□□□□ -2.34
SNED1Q8TER0 SNORD114-15-201ENST00000364687 72 ntBASIC0.41□□□□□ -2.34
SNED1Q8TER0 snoU13.13-201ENST00000458842 104 ntBASIC0.41□□□□□ -2.34
SNED1Q8TER0 RNU6-982P-201ENST00000516216 102 ntBASIC0.41□□□□□ -2.34
SNED1Q8TER0 RNU6-788P-201ENST00000390967 104 ntBASIC0.4□□□□□ -2.34
SNED1Q8TER0 HMGN2P22-201ENST00000427588 175 ntBASIC0.4□□□□□ -2.34
SNED1Q8TER0 RNU6-539P-201ENST00000516665 103 ntBASIC0.4□□□□□ -2.34
SNED1Q8TER0 RNU1-29P-201ENST00000606574 126 ntBASIC0.4□□□□□ -2.34
SNED1Q8TER0 U7.6-201ENST00000610841 64 ntBASIC0.4□□□□□ -2.34
SNED1Q8TER0 RNA5SP98-201ENST00000363158 137 ntBASIC0.39□□□□□ -2.35
SNED1Q8TER0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.39□□□□□ -2.35
SNED1Q8TER0 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
SNED1Q8TER0 RNU6-630P-201ENST00000391258 106 ntBASIC0.39□□□□□ -2.35
SNED1Q8TER0 MTND4LP1-201ENST00000446263 157 ntBASIC0.39□□□□□ -2.35
SNED1Q8TER0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.39□□□□□ -2.35
SNED1Q8TER0 RNU6-668P-201ENST00000364180 107 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 RNU6-645P-201ENST00000364649 106 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 RNU6-590P-201ENST00000365039 107 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 RNU6-1162P-201ENST00000384443 104 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 SNORA40.17-201ENST00000517256 115 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 MIR6739-201ENST00000622461 75 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 U6.111-201ENST00000636093 83 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
SNED1Q8TER0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
SNED1Q8TER0 Y_RNA.250-201ENST00000364542 110 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 SNORD116-24-201ENST00000384549 92 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 MIR516B1-201ENST00000385211 90 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 RNU6-848P-201ENST00000515948 107 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 RNU6-617P-201ENST00000516147 107 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 RNU6-473P-201ENST00000516164 107 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 MIR6755-201ENST00000619993 66 ntBASIC0.38□□□□□ -2.35
SNED1Q8TER0 MIR20A-201ENST00000362279 71 ntBASIC0.37□□□□□ -2.35
SNED1Q8TER0 SNORA9.1-201ENST00000362412 131 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms