Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 SNORD28-201ENST00000384706 75 ntBASIC1.16□□□□□ -2.22
CNOT11Q9UKZ1 MIR216B-201ENST00000390186 82 ntBASIC1.16□□□□□ -2.22
CNOT11Q9UKZ1 RNA5SP484-201ENST00000458857 111 ntBASIC1.16□□□□□ -2.22
CNOT11Q9UKZ1 RNU6-940P-201ENST00000363433 104 ntBASIC1.15□□□□□ -2.23
CNOT11Q9UKZ1 RNU6-936P-201ENST00000384005 107 ntBASIC1.15□□□□□ -2.23
CNOT11Q9UKZ1 RNU6-269P-201ENST00000391077 97 ntBASIC1.15□□□□□ -2.23
CNOT11Q9UKZ1 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
CNOT11Q9UKZ1 RNU6-392P-201ENST00000364926 101 ntBASIC1.14□□□□□ -2.23
CNOT11Q9UKZ1 MT-TY-201ENST00000387409 66 ntBASIC1.14□□□□□ -2.23
CNOT11Q9UKZ1 MIR4473-201ENST00000583731 91 ntBASIC1.14□□□□□ -2.23
CNOT11Q9UKZ1 MIR6504-201ENST00000613520 61 ntBASIC1.14□□□□□ -2.23
CNOT11Q9UKZ1 MIR6734-201ENST00000621166 68 ntBASIC1.14□□□□□ -2.23
CNOT11Q9UKZ1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CNOT11Q9UKZ1 RNU6-1312P-201ENST00000362425 108 ntBASIC1.13□□□□□ -2.23
CNOT11Q9UKZ1 SNORD18A-201ENST00000363753 72 ntBASIC1.13□□□□□ -2.23
CNOT11Q9UKZ1 RNU1-141P-201ENST00000364623 158 ntBASIC1.13□□□□□ -2.23
CNOT11Q9UKZ1 SNORD114-22-201ENST00000365423 72 ntBASIC1.13□□□□□ -2.23
CNOT11Q9UKZ1 SNORD105-201ENST00000386910 85 ntBASIC1.13□□□□□ -2.23
CNOT11Q9UKZ1 AC021146.9-201ENST00000512503 156 ntBASIC1.13□□□□□ -2.23
CNOT11Q9UKZ1 RNA5SP102-201ENST00000516865 106 ntBASIC1.13□□□□□ -2.23
CNOT11Q9UKZ1 MIR3678-201ENST00000578455 94 ntBASIC1.13□□□□□ -2.23
CNOT11Q9UKZ1 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
CNOT11Q9UKZ1 RNU6-726P-201ENST00000364680 107 ntBASIC1.12□□□□□ -2.23
CNOT11Q9UKZ1 SNORD124-201ENST00000459577 104 ntBASIC1.12□□□□□ -2.23
CNOT11Q9UKZ1 MIR4639-201ENST00000584938 69 ntBASIC1.12□□□□□ -2.23
CNOT11Q9UKZ1 RNU6-92P-201ENST00000605893 104 ntBASIC1.12□□□□□ -2.23
CNOT11Q9UKZ1 MIR6078-201ENST00000611069 100 ntBASIC1.12□□□□□ -2.23
CNOT11Q9UKZ1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CNOT11Q9UKZ1 SNORD60.1-201ENST00000362451 73 ntBASIC1.11□□□□□ -2.23
CNOT11Q9UKZ1 SNORA33.1-201ENST00000364957 130 ntBASIC1.11□□□□□ -2.23
CNOT11Q9UKZ1 SNORD41.1-201ENST00000391000 69 ntBASIC1.11□□□□□ -2.23
CNOT11Q9UKZ1 RNU7-74P-201ENST00000459104 62 ntBASIC1.11□□□□□ -2.23
CNOT11Q9UKZ1 Y_RNA.722-201ENST00000517279 114 ntBASIC1.11□□□□□ -2.23
CNOT11Q9UKZ1 MIR3612-201ENST00000579753 87 ntBASIC1.11□□□□□ -2.23
CNOT11Q9UKZ1 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
CNOT11Q9UKZ1 RNA5SP325-201ENST00000363756 130 ntBASIC1.1□□□□□ -2.23
CNOT11Q9UKZ1 RNU6-42P-201ENST00000384165 107 ntBASIC1.1□□□□□ -2.23
CNOT11Q9UKZ1 SNORA25-201ENST00000384384 134 ntBASIC1.1□□□□□ -2.23
CNOT11Q9UKZ1 MIR6739-201ENST00000622461 75 ntBASIC1.1□□□□□ -2.23
CNOT11Q9UKZ1 RNU6-1162P-201ENST00000384443 104 ntBASIC1.09□□□□□ -2.23
CNOT11Q9UKZ1 U7.7-201ENST00000459276 60 ntBASIC1.09□□□□□ -2.23
CNOT11Q9UKZ1 RNA5SP47-201ENST00000517230 109 ntBASIC1.09□□□□□ -2.23
CNOT11Q9UKZ1 MIR3938-201ENST00000582157 103 ntBASIC1.09□□□□□ -2.23
CNOT11Q9UKZ1 MIR548AE1-201ENST00000583292 70 ntBASIC1.09□□□□□ -2.23
CNOT11Q9UKZ1 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
CNOT11Q9UKZ1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
CNOT11Q9UKZ1 RNA5SP215-201ENST00000363440 122 ntBASIC1.08□□□□□ -2.24
CNOT11Q9UKZ1 SNORD114-27-201ENST00000363766 70 ntBASIC1.08□□□□□ -2.24
CNOT11Q9UKZ1 MIR652-201ENST00000385278 98 ntBASIC1.08□□□□□ -2.24
CNOT11Q9UKZ1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
CNOT11Q9UKZ1 RNU6-122P-201ENST00000516818 107 ntBASIC1.08□□□□□ -2.24
CNOT11Q9UKZ1 RNA5SP480-201ENST00000516840 109 ntBASIC1.08□□□□□ -2.24
CNOT11Q9UKZ1 MIR548AD-201ENST00000584780 82 ntBASIC1.08□□□□□ -2.24
CNOT11Q9UKZ1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
CNOT11Q9UKZ1 MIR582-201ENST00000365731 98 ntBASIC1.07□□□□□ -2.24
CNOT11Q9UKZ1 RNA5SP227-201ENST00000516184 113 ntBASIC1.07□□□□□ -2.24
CNOT11Q9UKZ1 MIR4752-201ENST00000579672 72 ntBASIC1.07□□□□□ -2.24
CNOT11Q9UKZ1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
CNOT11Q9UKZ1 RNU6-302P-201ENST00000365249 107 ntBASIC1.06□□□□□ -2.24
CNOT11Q9UKZ1 MIR517B-201ENST00000385102 67 ntBASIC1.06□□□□□ -2.24
CNOT11Q9UKZ1 RNU6-1246P-201ENST00000391064 107 ntBASIC1.06□□□□□ -2.24
CNOT11Q9UKZ1 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
CNOT11Q9UKZ1 RNA5SP220-201ENST00000516298 104 ntBASIC1.06□□□□□ -2.24
CNOT11Q9UKZ1 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
CNOT11Q9UKZ1 AC011195.1-201ENST00000578177 177 ntBASIC1.06□□□□□ -2.24
CNOT11Q9UKZ1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CNOT11Q9UKZ1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
CNOT11Q9UKZ1 SNORA9.1-201ENST00000362412 131 ntBASIC1.05□□□□□ -2.24
CNOT11Q9UKZ1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.05□□□□□ -2.24
CNOT11Q9UKZ1 MIR521-2-201ENST00000384818 87 ntBASIC1.05□□□□□ -2.24
CNOT11Q9UKZ1 MIR573-201ENST00000384964 99 ntBASIC1.05□□□□□ -2.24
CNOT11Q9UKZ1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CNOT11Q9UKZ1 U2.7-201ENST00000619197 100 ntBASIC1.05□□□□□ -2.24
CNOT11Q9UKZ1 U4.4-201ENST00000620626 117 ntBASIC1.05□□□□□ -2.24
CNOT11Q9UKZ1 Y_RNA.125-201ENST00000363371 111 ntBASIC1.04□□□□□ -2.24
CNOT11Q9UKZ1 AC006210.1-201ENST00000424882 111 ntBASIC1.04□□□□□ -2.24
CNOT11Q9UKZ1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.04□□□□□ -2.24
CNOT11Q9UKZ1 SCARNA16.5-201ENST00000517114 183 ntBASIC1.04□□□□□ -2.24
CNOT11Q9UKZ1 MIR6779-201ENST00000617283 64 ntBASIC1.04□□□□□ -2.24
CNOT11Q9UKZ1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CNOT11Q9UKZ1 SNORD114-4-201ENST00000363962 75 ntBASIC1.03□□□□□ -2.24
CNOT11Q9UKZ1 SNORA8.2-201ENST00000384372 139 ntBASIC1.03□□□□□ -2.24
CNOT11Q9UKZ1 SNORD12-201ENST00000391002 90 ntBASIC1.03□□□□□ -2.24
CNOT11Q9UKZ1 SNORD113-2-201ENST00000391082 72 ntBASIC1.03□□□□□ -2.24
CNOT11Q9UKZ1 SNORD99-201ENST00000408612 74 ntBASIC1.03□□□□□ -2.24
CNOT11Q9UKZ1 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
CNOT11Q9UKZ1 RNU6-135P-201ENST00000516769 101 ntBASIC1.03□□□□□ -2.24
CNOT11Q9UKZ1 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
CNOT11Q9UKZ1 SNORA36.1-201ENST00000363424 132 ntBASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 Y_RNA.325-201ENST00000365171 122 ntBASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 RNU6-1184P-201ENST00000384588 108 ntBASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 FABP5P4-201ENST00000437203 171 ntBASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 RNU7-174P-201ENST00000516248 59 ntBASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 MIR6515-201ENST00000619843 57 ntBASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
CNOT11Q9UKZ1 RNY1P8-201ENST00000383970 114 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms