Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.82□□□□□ -2.7
HLA-DMBP28068 RNU6-412P-201ENST00000516434 106 ntBASIC-1.82□□□□□ -2.7
HLA-DMBP28068 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.83□□□□□ -2.7
HLA-DMBP28068 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.83□□□□□ -2.7
HLA-DMBP28068 SNORD115-22-201ENST00000364456 82 ntBASIC-1.83□□□□□ -2.7
HLA-DMBP28068 MIR1263-201ENST00000408324 86 ntBASIC-1.83□□□□□ -2.7
HLA-DMBP28068 RNU2-38P-201ENST00000410856 79 ntBASIC-1.83□□□□□ -2.7
HLA-DMBP28068 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.83□□□□□ -2.7
HLA-DMBP28068 AC020661.2-201ENST00000560114 134 ntBASIC-1.83□□□□□ -2.7
HLA-DMBP28068 AC006254.2-201ENST00000603259 279 ntBASIC-1.83□□□□□ -2.7
HLA-DMBP28068 SNORA2.1-201ENST00000363089 137 ntBASIC-1.84□□□□□ -2.7
HLA-DMBP28068 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.84□□□□□ -2.7
HLA-DMBP28068 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.84□□□□□ -2.7
HLA-DMBP28068 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.84□□□□□ -2.7
HLA-DMBP28068 RNU6-62P-201ENST00000516526 102 ntBASIC-1.84□□□□□ -2.7
HLA-DMBP28068 RNU6-238P-201ENST00000363313 106 ntBASIC-1.85□□□□□ -2.71
HLA-DMBP28068 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.85□□□□□ -2.71
HLA-DMBP28068 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.85□□□□□ -2.71
HLA-DMBP28068 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.85□□□□□ -2.71
HLA-DMBP28068 RNU7-197P-201ENST00000458836 62 ntBASIC-1.85□□□□□ -2.71
HLA-DMBP28068 CYP3A54P-201ENST00000566950 75 ntBASIC-1.85□□□□□ -2.71
HLA-DMBP28068 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.86□□□□□ -2.71
HLA-DMBP28068 RNU6-382P-201ENST00000365181 106 ntBASIC-1.86□□□□□ -2.71
HLA-DMBP28068 SNORA33.2-201ENST00000365413 134 ntBASIC-1.86□□□□□ -2.71
HLA-DMBP28068 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.86□□□□□ -2.71
HLA-DMBP28068 MIR577-201ENST00000385196 96 ntBASIC-1.86□□□□□ -2.71
HLA-DMBP28068 MIR507-201ENST00000385234 94 ntBASIC-1.86□□□□□ -2.71
HLA-DMBP28068 RNA5SP86-201ENST00000390869 98 ntBASIC-1.86□□□□□ -2.71
HLA-DMBP28068 AL353691.2-201ENST00000443795 59 ntBASIC-1.86□□□□□ -2.71
HLA-DMBP28068 RNU7-154P-201ENST00000516194 62 ntBASIC-1.86□□□□□ -2.71
HLA-DMBP28068 RNU6-915P-201ENST00000364943 103 ntBASIC-1.87□□□□□ -2.71
HLA-DMBP28068 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.87□□□□□ -2.71
HLA-DMBP28068 RNU6-639P-201ENST00000384074 107 ntBASIC-1.87□□□□□ -2.71
HLA-DMBP28068 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.87□□□□□ -2.71
HLA-DMBP28068 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.87□□□□□ -2.71
HLA-DMBP28068 AL078595.1-201ENST00000404458 226 ntBASIC-1.87□□□□□ -2.71
HLA-DMBP28068 RNU6-732P-201ENST00000516033 103 ntBASIC-1.87□□□□□ -2.71
HLA-DMBP28068 RNU4-71P-201ENST00000516258 113 ntBASIC-1.87□□□□□ -2.71
HLA-DMBP28068 MIR4694-201ENST00000578534 80 ntBASIC-1.87□□□□□ -2.71
HLA-DMBP28068 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.88□□□□□ -2.71
HLA-DMBP28068 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.88□□□□□ -2.71
HLA-DMBP28068 SNORD4B-201ENST00000459083 72 ntBASIC-1.88□□□□□ -2.71
HLA-DMBP28068 MIR4439-201ENST00000583746 80 ntBASIC-1.88□□□□□ -2.71
HLA-DMBP28068 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.88□□□□□ -2.71
HLA-DMBP28068 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.89□□□□□ -2.71
HLA-DMBP28068 RNU6-540P-201ENST00000384622 101 ntBASIC-1.89□□□□□ -2.71
HLA-DMBP28068 RNU6-644P-201ENST00000391155 98 ntBASIC-1.89□□□□□ -2.71
HLA-DMBP28068 MIR548H1-201ENST00000408610 102 ntBASIC-1.89□□□□□ -2.71
HLA-DMBP28068 RNA5SP147-201ENST00000516493 109 ntBASIC-1.89□□□□□ -2.71
HLA-DMBP28068 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.89□□□□□ -2.71
HLA-DMBP28068 MIR548S-201ENST00000581352 82 ntBASIC-1.89□□□□□ -2.71
HLA-DMBP28068 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.9□□□□□ -2.71
HLA-DMBP28068 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
HLA-DMBP28068 RNU6-460P-201ENST00000391158 108 ntBASIC-1.9□□□□□ -2.71
HLA-DMBP28068 RNU6-983P-201ENST00000516004 103 ntBASIC-1.9□□□□□ -2.71
HLA-DMBP28068 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.9□□□□□ -2.71
HLA-DMBP28068 MIR3657-201ENST00000584818 117 ntBASIC-1.9□□□□□ -2.71
HLA-DMBP28068 RNU6-832P-201ENST00000363319 107 ntBASIC-1.91□□□□□ -2.72
HLA-DMBP28068 MTATP8P1-201ENST00000467115 207 ntBASIC-1.91□□□□□ -2.72
HLA-DMBP28068 RNA5SP272-201ENST00000516095 111 ntBASIC-1.91□□□□□ -2.72
HLA-DMBP28068 MIR6509-201ENST00000614603 85 ntBASIC-1.91□□□□□ -2.72
HLA-DMBP28068 RNU6-80P-201ENST00000384195 107 ntBASIC-1.92□□□□□ -2.72
HLA-DMBP28068 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.92□□□□□ -2.72
HLA-DMBP28068 SNORD90-201ENST00000391145 111 ntBASIC-1.92□□□□□ -2.72
HLA-DMBP28068 MTATP6P29-201ENST00000415057 132 ntBASIC-1.92□□□□□ -2.72
HLA-DMBP28068 MIR548Z-201ENST00000584743 97 ntBASIC-1.92□□□□□ -2.72
HLA-DMBP28068 RNU4-11P-201ENST00000365287 132 ntBASIC-1.93□□□□□ -2.72
HLA-DMBP28068 MIR521-2-201ENST00000384818 87 ntBASIC-1.93□□□□□ -2.72
HLA-DMBP28068 RNA5SP292-201ENST00000390974 118 ntBASIC-1.93□□□□□ -2.72
HLA-DMBP28068 RNU6-781P-201ENST00000516377 101 ntBASIC-1.93□□□□□ -2.72
HLA-DMBP28068 MIR4773-1-201ENST00000637203 78 ntBASIC-1.93□□□□□ -2.72
HLA-DMBP28068 RNY3P2-201ENST00000362918 102 ntBASIC-1.94□□□□□ -2.72
HLA-DMBP28068 RNU6-824P-201ENST00000363724 104 ntBASIC-1.94□□□□□ -2.72
HLA-DMBP28068 SNORD18.1-201ENST00000363807 70 ntBASIC-1.94□□□□□ -2.72
HLA-DMBP28068 RNU6-151P-201ENST00000364158 107 ntBASIC-1.94□□□□□ -2.72
HLA-DMBP28068 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.94□□□□□ -2.72
HLA-DMBP28068 MIR203A-201ENST00000384836 110 ntBASIC-1.94□□□□□ -2.72
HLA-DMBP28068 MIR548F4-201ENST00000408515 105 ntBASIC-1.94□□□□□ -2.72
HLA-DMBP28068 AL158147.1-201ENST00000443970 75 ntBASIC-1.94□□□□□ -2.72
HLA-DMBP28068 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.94□□□□□ -2.72
HLA-DMBP28068 RNU6-704P-201ENST00000364162 103 ntBASIC-1.95□□□□□ -2.72
HLA-DMBP28068 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.95□□□□□ -2.72
HLA-DMBP28068 MIR519A2-201ENST00000384990 87 ntBASIC-1.95□□□□□ -2.72
HLA-DMBP28068 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.95□□□□□ -2.72
HLA-DMBP28068 RNU6-168P-201ENST00000516189 101 ntBASIC-1.95□□□□□ -2.72
HLA-DMBP28068 SNORA18.5-201ENST00000516616 101 ntBASIC-1.95□□□□□ -2.72
HLA-DMBP28068 AP001340.1-201ENST00000624405 217 ntBASIC-1.95□□□□□ -2.72
HLA-DMBP28068 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.96□□□□□ -2.72
HLA-DMBP28068 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.96□□□□□ -2.72
HLA-DMBP28068 RNY3P14-201ENST00000384309 102 ntBASIC-1.96□□□□□ -2.72
HLA-DMBP28068 MIR548I1-201ENST00000408810 149 ntBASIC-1.96□□□□□ -2.72
HLA-DMBP28068 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.96□□□□□ -2.72
HLA-DMBP28068 MIR4490-201ENST00000582647 84 ntBASIC-1.96□□□□□ -2.72
HLA-DMBP28068 SNORD115-27-201ENST00000364430 82 ntBASIC-1.97□□□□□ -2.72
HLA-DMBP28068 RNU6-119P-201ENST00000364882 107 ntBASIC-1.97□□□□□ -2.72
HLA-DMBP28068 RNU6-813P-201ENST00000384691 107 ntBASIC-1.97□□□□□ -2.72
HLA-DMBP28068 RNU6-400P-201ENST00000391173 106 ntBASIC-1.97□□□□□ -2.72
HLA-DMBP28068 SNORA81.3-201ENST00000517283 198 ntBASIC-1.97□□□□□ -2.72
HLA-DMBP28068 AC022559.1-201ENST00000520905 205 ntBASIC-1.97□□□□□ -2.72
HLA-DMBP28068 AP002795.1-201ENST00000534879 84 ntBASIC-1.97□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 324.3 ms