Protein–RNA interactions for Protein: P16499

PDE6A, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6AP16499 MIR508-201ENST00000384857 115 ntBASIC0.84□□□□□ -2.27
PDE6AP16499 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
PDE6AP16499 RNU6-70P-201ENST00000516438 60 ntBASIC0.83□□□□□ -2.28
PDE6AP16499 RNU6-687P-201ENST00000516443 89 ntBASIC0.83□□□□□ -2.28
PDE6AP16499 RNU6V-201ENST00000384105 107 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 MIR4460-201ENST00000577862 86 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 MIR3675-201ENST00000583661 73 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 MIR7107-201ENST00000611489 80 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 MIR6515-201ENST00000619843 57 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 AC092634.7-201ENST00000621022 103 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 MIR664A-201ENST00000626086 82 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 MIR4773-1-201ENST00000637203 78 ntBASIC0.81□□□□□ -2.28
PDE6AP16499 RNA5SP517-201ENST00000364724 117 ntBASIC0.8□□□□□ -2.28
PDE6AP16499 RNU6-54P-201ENST00000365563 107 ntBASIC0.8□□□□□ -2.28
PDE6AP16499 SNORA8.1-201ENST00000384250 140 ntBASIC0.8□□□□□ -2.28
PDE6AP16499 AC073261.1-201ENST00000429409 121 ntBASIC0.8□□□□□ -2.28
PDE6AP16499 RNA5SP484-201ENST00000458857 111 ntBASIC0.8□□□□□ -2.28
PDE6AP16499 RNU6-274P-201ENST00000459566 107 ntBASIC0.8□□□□□ -2.28
PDE6AP16499 RNU6-1015P-201ENST00000517121 99 ntBASIC0.8□□□□□ -2.28
PDE6AP16499 AC069503.3-201ENST00000618674 145 ntBASIC0.8□□□□□ -2.28
PDE6AP16499 AC073869.9-201ENST00000641610 120 ntBASIC0.8□□□□□ -2.28
PDE6AP16499 RNU6-587P-201ENST00000391282 106 ntBASIC0.79□□□□□ -2.28
PDE6AP16499 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
PDE6AP16499 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
PDE6AP16499 SNORD42B-201ENST00000458893 67 ntBASIC0.79□□□□□ -2.28
PDE6AP16499 AL590095.2-201ENST00000604136 117 ntBASIC0.79□□□□□ -2.28
PDE6AP16499 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
PDE6AP16499 NAMPTP3-201ENST00000569273 224 ntBASIC0.78□□□□□ -2.28
PDE6AP16499 RNU6-1039P-201ENST00000383931 107 ntBASIC0.77□□□□□ -2.29
PDE6AP16499 RNU6-634P-201ENST00000459134 106 ntBASIC0.77□□□□□ -2.29
PDE6AP16499 RNU6-1241P-201ENST00000384536 107 ntBASIC0.76□□□□□ -2.29
PDE6AP16499 SNORA40.8-201ENST00000411034 126 ntBASIC0.76□□□□□ -2.29
PDE6AP16499 SNORD118-201ENST00000363593 134 ntBASIC0.75□□□□□ -2.29
PDE6AP16499 AC139453.2-201ENST00000487255 133 ntBASIC0.75□□□□□ -2.29
PDE6AP16499 RNU6-871P-201ENST00000516122 100 ntBASIC0.75□□□□□ -2.29
PDE6AP16499 RNU1-29P-201ENST00000606574 126 ntBASIC0.75□□□□□ -2.29
PDE6AP16499 SNORD71-201ENST00000411292 86 ntBASIC0.74□□□□□ -2.29
PDE6AP16499 AL691482.2-201ENST00000457453 84 ntBASIC0.74□□□□□ -2.29
PDE6AP16499 AC018659.1-201ENST00000551083 169 ntBASIC0.74□□□□□ -2.29
PDE6AP16499 PVT1_3.1-201ENST00000620853 95 ntBASIC0.74□□□□□ -2.29
PDE6AP16499 RNU5B-6P-201ENST00000516765 68 ntBASIC0.73□□□□□ -2.29
PDE6AP16499 MIR5706-201ENST00000579841 80 ntBASIC0.73□□□□□ -2.29
PDE6AP16499 SNORD114-4-201ENST00000363962 75 ntBASIC0.72□□□□□ -2.29
PDE6AP16499 RNA5SP499-201ENST00000363982 119 ntBASIC0.72□□□□□ -2.29
PDE6AP16499 RNU6-260P-201ENST00000384092 107 ntBASIC0.72□□□□□ -2.29
PDE6AP16499 SNORD110-201ENST00000408189 75 ntBASIC0.72□□□□□ -2.29
PDE6AP16499 AC114801.3-201ENST00000510231 177 ntBASIC0.72□□□□□ -2.29
PDE6AP16499 SNORA25.18-201ENST00000607153 114 ntBASIC0.72□□□□□ -2.29
PDE6AP16499 MIR8053-201ENST00000613344 75 ntBASIC0.72□□□□□ -2.29
PDE6AP16499 MIR6509-201ENST00000614603 85 ntBASIC0.72□□□□□ -2.29
PDE6AP16499 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
PDE6AP16499 SNORD45.1-201ENST00000363181 77 ntBASIC0.71□□□□□ -2.3
PDE6AP16499 SNORD115-22-201ENST00000364456 82 ntBASIC0.71□□□□□ -2.3
PDE6AP16499 MIR598-201ENST00000384868 97 ntBASIC0.71□□□□□ -2.3
PDE6AP16499 MIR518A1-201ENST00000385068 85 ntBASIC0.71□□□□□ -2.3
PDE6AP16499 MIR154-201ENST00000385243 84 ntBASIC0.71□□□□□ -2.3
PDE6AP16499 RNU6-848P-201ENST00000515948 107 ntBASIC0.71□□□□□ -2.3
PDE6AP16499 RNU6-617P-201ENST00000516147 107 ntBASIC0.71□□□□□ -2.3
PDE6AP16499 RNU6-473P-201ENST00000516164 107 ntBASIC0.71□□□□□ -2.3
PDE6AP16499 RNU6-1049P-201ENST00000516414 107 ntBASIC0.71□□□□□ -2.3
PDE6AP16499 SNORD115-31-201ENST00000365318 82 ntBASIC0.7□□□□□ -2.3
PDE6AP16499 RNU6-540P-201ENST00000384622 101 ntBASIC0.7□□□□□ -2.3
PDE6AP16499 MIR7-2-201ENST00000384970 110 ntBASIC0.7□□□□□ -2.3
PDE6AP16499 AC006210.1-201ENST00000424882 111 ntBASIC0.7□□□□□ -2.3
PDE6AP16499 AC069271.1-201ENST00000445577 156 ntBASIC0.7□□□□□ -2.3
PDE6AP16499 SNORA40.17-201ENST00000517256 115 ntBASIC0.7□□□□□ -2.3
PDE6AP16499 MIR3657-201ENST00000584818 117 ntBASIC0.7□□□□□ -2.3
PDE6AP16499 SNORA70.25-201ENST00000612741 95 ntBASIC0.7□□□□□ -2.3
PDE6AP16499 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
PDE6AP16499 MIR4752-201ENST00000579672 72 ntBASIC0.69□□□□□ -2.3
PDE6AP16499 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
PDE6AP16499 Y_RNA.407-201ENST00000383986 113 ntBASIC0.68□□□□□ -2.3
PDE6AP16499 RNU6-539P-201ENST00000516665 103 ntBASIC0.68□□□□□ -2.3
PDE6AP16499 SNORA2.1-201ENST00000363089 137 ntBASIC0.67□□□□□ -2.3
PDE6AP16499 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
PDE6AP16499 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.66□□□□□ -2.3
PDE6AP16499 SNORD45A-201ENST00000384512 84 ntBASIC0.66□□□□□ -2.3
PDE6AP16499 Y_RNA.540-201ENST00000384638 111 ntBASIC0.66□□□□□ -2.3
PDE6AP16499 RNU6-604P-201ENST00000390917 100 ntBASIC0.66□□□□□ -2.3
PDE6AP16499 HMGN2P22-201ENST00000427588 175 ntBASIC0.66□□□□□ -2.3
PDE6AP16499 SCARNA17.3-201ENST00000516381 125 ntBASIC0.66□□□□□ -2.3
PDE6AP16499 MIR548AE1-201ENST00000583292 70 ntBASIC0.66□□□□□ -2.3
PDE6AP16499 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
PDE6AP16499 RNU6-990P-201ENST00000364385 104 ntBASIC0.65□□□□□ -2.31
PDE6AP16499 Y_RNA.250-201ENST00000364542 110 ntBASIC0.65□□□□□ -2.31
PDE6AP16499 MIR203A-201ENST00000384836 110 ntBASIC0.65□□□□□ -2.31
PDE6AP16499 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
PDE6AP16499 MIR652-201ENST00000385278 98 ntBASIC0.65□□□□□ -2.31
PDE6AP16499 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
PDE6AP16499 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.65□□□□□ -2.31
PDE6AP16499 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
PDE6AP16499 SNORD113.1-201ENST00000363280 73 ntBASIC0.64□□□□□ -2.31
PDE6AP16499 Y_RNA.125-201ENST00000363371 111 ntBASIC0.64□□□□□ -2.31
PDE6AP16499 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
PDE6AP16499 SNORA2A-201ENST00000383885 135 ntBASIC0.63□□□□□ -2.31
PDE6AP16499 RNU6-863P-201ENST00000515989 104 ntBASIC0.63□□□□□ -2.31
PDE6AP16499 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
PDE6AP16499 RNU6-881P-201ENST00000516813 102 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms