Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.98□□□□□ -2.25
SYPP08247 RNU6-634P-201ENST00000459134 106 ntBASIC0.98□□□□□ -2.25
SYPP08247 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
SYPP08247 MIR373-201ENST00000362273 69 ntBASIC0.97□□□□□ -2.25
SYPP08247 RNA5SP484-201ENST00000458857 111 ntBASIC0.97□□□□□ -2.25
SYPP08247 AC139453.2-201ENST00000487255 133 ntBASIC0.97□□□□□ -2.25
SYPP08247 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
SYPP08247 RNU6-871P-201ENST00000516122 100 ntBASIC0.97□□□□□ -2.25
SYPP08247 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.97□□□□□ -2.25
SYPP08247 RN7SL793P-201ENST00000583259 296 ntBASIC0.97□□□□□ -2.25
SYPP08247 MIR7107-201ENST00000611489 80 ntBASIC0.97□□□□□ -2.25
SYPP08247 RNY1P8-201ENST00000383970 114 ntBASIC0.96□□□□□ -2.26
SYPP08247 SNORD42B-201ENST00000458893 67 ntBASIC0.96□□□□□ -2.26
SYPP08247 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
SYPP08247 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SYPP08247 AL691482.2-201ENST00000457453 84 ntBASIC0.95□□□□□ -2.26
SYPP08247 RNU6-1039P-201ENST00000383931 107 ntBASIC0.94□□□□□ -2.26
SYPP08247 MIR216A-201ENST00000385063 110 ntBASIC0.94□□□□□ -2.26
SYPP08247 MIR154-201ENST00000385243 84 ntBASIC0.94□□□□□ -2.26
SYPP08247 AC114801.3-201ENST00000510231 177 ntBASIC0.94□□□□□ -2.26
SYPP08247 RNA5SP436-201ENST00000516020 115 ntBASIC0.94□□□□□ -2.26
SYPP08247 AC069503.3-201ENST00000618674 145 ntBASIC0.94□□□□□ -2.26
SYPP08247 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SYPP08247 SNORA36.2-201ENST00000384004 127 ntBASIC0.93□□□□□ -2.26
SYPP08247 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
SYPP08247 AC073869.9-201ENST00000641610 120 ntBASIC0.93□□□□□ -2.26
SYPP08247 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SYPP08247 SNORD115-31-201ENST00000365318 82 ntBASIC0.92□□□□□ -2.26
SYPP08247 MIR140-201ENST00000385282 100 ntBASIC0.92□□□□□ -2.26
SYPP08247 MIR3973-201ENST00000579824 107 ntBASIC0.92□□□□□ -2.26
SYPP08247 MIR6509-201ENST00000614603 85 ntBASIC0.92□□□□□ -2.26
SYPP08247 SNORD45.1-201ENST00000363181 77 ntBASIC0.91□□□□□ -2.26
SYPP08247 RNA5SP517-201ENST00000364724 117 ntBASIC0.91□□□□□ -2.26
SYPP08247 RNU5B-6P-201ENST00000516765 68 ntBASIC0.91□□□□□ -2.26
SYPP08247 SNORD115-22-201ENST00000364456 82 ntBASIC0.9□□□□□ -2.27
SYPP08247 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
SYPP08247 AC018659.1-201ENST00000551083 169 ntBASIC0.9□□□□□ -2.27
SYPP08247 MIR8053-201ENST00000613344 75 ntBASIC0.9□□□□□ -2.27
SYPP08247 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
SYPP08247 RNU6-540P-201ENST00000384622 101 ntBASIC0.89□□□□□ -2.27
SYPP08247 RNU6-604P-201ENST00000390917 100 ntBASIC0.89□□□□□ -2.27
SYPP08247 SNORD45A-201ENST00000384512 84 ntBASIC0.88□□□□□ -2.27
SYPP08247 MIR203A-201ENST00000384836 110 ntBASIC0.88□□□□□ -2.27
SYPP08247 RNU6-539P-201ENST00000516665 103 ntBASIC0.88□□□□□ -2.27
SYPP08247 AC006210.1-201ENST00000424882 111 ntBASIC0.87□□□□□ -2.27
SYPP08247 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
SYPP08247 MIR3657-201ENST00000584818 117 ntBASIC0.87□□□□□ -2.27
SYPP08247 AC092634.7-201ENST00000621022 103 ntBASIC0.87□□□□□ -2.27
SYPP08247 RNU6-260P-201ENST00000384092 107 ntBASIC0.86□□□□□ -2.27
SYPP08247 RNU6-110P-201ENST00000384508 104 ntBASIC0.86□□□□□ -2.27
SYPP08247 SNORD110-201ENST00000408189 75 ntBASIC0.86□□□□□ -2.27
SYPP08247 MIR4752-201ENST00000579672 72 ntBASIC0.86□□□□□ -2.27
SYPP08247 SNORA70.25-201ENST00000612741 95 ntBASIC0.86□□□□□ -2.27
SYPP08247 SNORD118-201ENST00000363593 134 ntBASIC0.85□□□□□ -2.27
SYPP08247 SNORD114-4-201ENST00000363962 75 ntBASIC0.85□□□□□ -2.27
SYPP08247 SNORA40.17-201ENST00000517256 115 ntBASIC0.85□□□□□ -2.27
SYPP08247 RNU1-29P-201ENST00000606574 126 ntBASIC0.85□□□□□ -2.27
SYPP08247 SNORA25.18-201ENST00000607153 114 ntBASIC0.85□□□□□ -2.27
SYPP08247 RNU6-990P-201ENST00000364385 104 ntBASIC0.84□□□□□ -2.27
SYPP08247 RNU6-649P-201ENST00000384463 107 ntBASIC0.84□□□□□ -2.27
SYPP08247 AC069271.1-201ENST00000445577 156 ntBASIC0.84□□□□□ -2.27
SYPP08247 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
SYPP08247 RNU6-881P-201ENST00000516813 102 ntBASIC0.84□□□□□ -2.27
SYPP08247 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
SYPP08247 SNORD113.1-201ENST00000363280 73 ntBASIC0.83□□□□□ -2.28
SYPP08247 SNORD30.1-201ENST00000391309 70 ntBASIC0.83□□□□□ -2.28
SYPP08247 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.83□□□□□ -2.28
SYPP08247 SNORA2.1-201ENST00000363089 137 ntBASIC0.82□□□□□ -2.28
SYPP08247 Y_RNA.407-201ENST00000383986 113 ntBASIC0.82□□□□□ -2.28
SYPP08247 RNU6-895P-201ENST00000384125 103 ntBASIC0.82□□□□□ -2.28
SYPP08247 MIR193B-201ENST00000384907 83 ntBASIC0.82□□□□□ -2.28
SYPP08247 RNU6-663P-201ENST00000391105 106 ntBASIC0.82□□□□□ -2.28
SYPP08247 SNORA40.8-201ENST00000411034 126 ntBASIC0.82□□□□□ -2.28
SYPP08247 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
SYPP08247 MIR548AE1-201ENST00000583292 70 ntBASIC0.82□□□□□ -2.28
SYPP08247 MIR6513-201ENST00000621188 64 ntBASIC0.82□□□□□ -2.28
SYPP08247 RNU6-590P-201ENST00000365039 107 ntBASIC0.81□□□□□ -2.28
SYPP08247 RNU6-788P-201ENST00000390967 104 ntBASIC0.81□□□□□ -2.28
SYPP08247 MIR4473-201ENST00000583731 91 ntBASIC0.81□□□□□ -2.28
SYPP08247 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
SYPP08247 MIR1273G-201ENST00000577677 100 ntBASIC0.8□□□□□ -2.28
SYPP08247 MIR5706-201ENST00000579841 80 ntBASIC0.8□□□□□ -2.28
SYPP08247 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
SYPP08247 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SYPP08247 MIR652-201ENST00000385278 98 ntBASIC0.79□□□□□ -2.28
SYPP08247 HMGN2P22-201ENST00000427588 175 ntBASIC0.79□□□□□ -2.28
SYPP08247 RNU6-982P-201ENST00000516216 102 ntBASIC0.79□□□□□ -2.28
SYPP08247 U6.111-201ENST00000636093 83 ntBASIC0.79□□□□□ -2.28
SYPP08247 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
SYPP08247 SNORD116-24-201ENST00000384549 92 ntBASIC0.78□□□□□ -2.28
SYPP08247 MIR518A1-201ENST00000385068 85 ntBASIC0.78□□□□□ -2.28
SYPP08247 SNORD71-201ENST00000411292 86 ntBASIC0.78□□□□□ -2.28
SYPP08247 SCARNA17.3-201ENST00000516381 125 ntBASIC0.78□□□□□ -2.28
SYPP08247 RNU6-1216P-201ENST00000362590 107 ntBASIC0.77□□□□□ -2.29
SYPP08247 SNORD114-23-201ENST00000363536 72 ntBASIC0.77□□□□□ -2.29
SYPP08247 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
SYPP08247 RNU4-54P-201ENST00000516428 129 ntBASIC0.77□□□□□ -2.29
SYPP08247 RNA5SP147-201ENST00000516493 109 ntBASIC0.77□□□□□ -2.29
SYPP08247 Y_RNA.386-201ENST00000383913 105 ntBASIC0.76□□□□□ -2.29
SYPP08247 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms