Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.2
SMPD4Q9NXE4 MIR519E-201ENST00000385075 84 ntBASIC1.28□□□□□ -2.2
SMPD4Q9NXE4 RNU6-994P-201ENST00000410507 111 ntBASIC1.28□□□□□ -2.2
SMPD4Q9NXE4 MIR100-201ENST00000385259 80 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 RNU1-119P-201ENST00000391122 165 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 AC079150.2-201ENST00000443733 78 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 SNORD42B-201ENST00000458893 67 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 RNU7-104P-201ENST00000459398 79 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 RNA5SP102-201ENST00000516865 106 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 SNORA40.17-201ENST00000517256 115 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 MIR6509-201ENST00000614603 85 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 MIR548O2-201ENST00000616090 70 ntBASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
SMPD4Q9NXE4 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
SMPD4Q9NXE4 MIR520F-201ENST00000384824 87 ntBASIC1.26□□□□□ -2.21
SMPD4Q9NXE4 MIR617-201ENST00000385030 97 ntBASIC1.26□□□□□ -2.21
SMPD4Q9NXE4 MIR1276-201ENST00000408707 83 ntBASIC1.26□□□□□ -2.21
SMPD4Q9NXE4 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
SMPD4Q9NXE4 AL136317.1-201ENST00000612653 226 ntBASIC1.26□□□□□ -2.21
SMPD4Q9NXE4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.26□□□□□ -2.21
SMPD4Q9NXE4 AC069503.3-201ENST00000618674 145 ntBASIC1.26□□□□□ -2.21
SMPD4Q9NXE4 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
SMPD4Q9NXE4 MIR3657-201ENST00000584818 117 ntBASIC1.25□□□□□ -2.21
SMPD4Q9NXE4 RMST_2.1-201ENST00000617263 136 ntBASIC1.25□□□□□ -2.21
SMPD4Q9NXE4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SMPD4Q9NXE4 SNORD114-27-201ENST00000363766 70 ntBASIC1.24□□□□□ -2.21
SMPD4Q9NXE4 MIR1827-201ENST00000408549 66 ntBASIC1.24□□□□□ -2.21
SMPD4Q9NXE4 AC092634.7-201ENST00000621022 103 ntBASIC1.24□□□□□ -2.21
SMPD4Q9NXE4 AC073869.9-201ENST00000641610 120 ntBASIC1.24□□□□□ -2.21
SMPD4Q9NXE4 MIR1-1-201ENST00000362147 71 ntBASIC1.23□□□□□ -2.21
SMPD4Q9NXE4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.23□□□□□ -2.21
SMPD4Q9NXE4 Y_RNA.375-201ENST00000365625 101 ntBASIC1.23□□□□□ -2.21
SMPD4Q9NXE4 RNU6V-201ENST00000384105 107 ntBASIC1.23□□□□□ -2.21
SMPD4Q9NXE4 MIR644A-201ENST00000385262 94 ntBASIC1.23□□□□□ -2.21
SMPD4Q9NXE4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.23□□□□□ -2.21
SMPD4Q9NXE4 AC067940.1-201ENST00000458411 300 ntBASIC1.23□□□□□ -2.21
SMPD4Q9NXE4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SMPD4Q9NXE4 RNU6-829P-201ENST00000363700 112 ntBASIC1.22□□□□□ -2.21
SMPD4Q9NXE4 RNU6-668P-201ENST00000364180 107 ntBASIC1.22□□□□□ -2.21
SMPD4Q9NXE4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
SMPD4Q9NXE4 RNU6-990P-201ENST00000364385 104 ntBASIC1.22□□□□□ -2.21
SMPD4Q9NXE4 MIR96-201ENST00000362288 78 ntBASIC1.21□□□□□ -2.22
SMPD4Q9NXE4 RNU6-645P-201ENST00000364649 106 ntBASIC1.21□□□□□ -2.22
SMPD4Q9NXE4 RNU6-141P-201ENST00000410499 105 ntBASIC1.21□□□□□ -2.22
SMPD4Q9NXE4 MTND4LP1-201ENST00000446263 157 ntBASIC1.21□□□□□ -2.22
SMPD4Q9NXE4 AC002350.1-201ENST00000490759 375 ntBASIC1.21□□□□□ -2.22
SMPD4Q9NXE4 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
SMPD4Q9NXE4 AC067863.3-201ENST00000624172 122 ntBASIC1.21□□□□□ -2.22
SMPD4Q9NXE4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
SMPD4Q9NXE4 RNU6-260P-201ENST00000384092 107 ntBASIC1.2□□□□□ -2.22
SMPD4Q9NXE4 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
SMPD4Q9NXE4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.2□□□□□ -2.22
SMPD4Q9NXE4 RNU6-1079P-201ENST00000362861 110 ntBASIC1.19□□□□□ -2.22
SMPD4Q9NXE4 RNA5SP192-201ENST00000364404 120 ntBASIC1.19□□□□□ -2.22
SMPD4Q9NXE4 RNU6-614P-201ENST00000384369 107 ntBASIC1.19□□□□□ -2.22
SMPD4Q9NXE4 MIR216B-201ENST00000390186 82 ntBASIC1.19□□□□□ -2.22
SMPD4Q9NXE4 RNU6-542P-201ENST00000516405 103 ntBASIC1.19□□□□□ -2.22
SMPD4Q9NXE4 RNA5SP147-201ENST00000516493 109 ntBASIC1.19□□□□□ -2.22
SMPD4Q9NXE4 RNU6-656P-201ENST00000516785 107 ntBASIC1.19□□□□□ -2.22
SMPD4Q9NXE4 U6.59-201ENST00000615686 107 ntBASIC1.19□□□□□ -2.22
SMPD4Q9NXE4 Y_RNA.236-201ENST00000364427 111 ntBASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 SNORD114-22-201ENST00000365423 72 ntBASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 SNORD28-201ENST00000384706 75 ntBASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 SNORD41.1-201ENST00000391000 69 ntBASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 AC244669.1-204ENST00000621564 178 ntBASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SMPD4Q9NXE4 SNORA25.5-201ENST00000363782 126 ntBASIC1.17□□□□□ -2.22
SMPD4Q9NXE4 SCARNA21.1-201ENST00000515996 128 ntBASIC1.17□□□□□ -2.22
SMPD4Q9NXE4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
SMPD4Q9NXE4 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
SMPD4Q9NXE4 RNU6-446P-201ENST00000362827 106 ntBASIC1.16□□□□□ -2.22
SMPD4Q9NXE4 MT-TY-201ENST00000387409 66 ntBASIC1.16□□□□□ -2.22
SMPD4Q9NXE4 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
SMPD4Q9NXE4 MIR4452-201ENST00000583004 71 ntBASIC1.16□□□□□ -2.22
SMPD4Q9NXE4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SMPD4Q9NXE4 SNORA2.1-201ENST00000363089 137 ntBASIC1.15□□□□□ -2.23
SMPD4Q9NXE4 RNU6-726P-201ENST00000364680 107 ntBASIC1.15□□□□□ -2.23
SMPD4Q9NXE4 MIR7-2-201ENST00000384970 110 ntBASIC1.15□□□□□ -2.23
SMPD4Q9NXE4 SNORD12-201ENST00000391002 90 ntBASIC1.15□□□□□ -2.23
SMPD4Q9NXE4 RNA5SP299-201ENST00000391203 116 ntBASIC1.15□□□□□ -2.23
SMPD4Q9NXE4 MIR466-201ENST00000580653 84 ntBASIC1.15□□□□□ -2.23
SMPD4Q9NXE4 MIR4639-201ENST00000584938 69 ntBASIC1.15□□□□□ -2.23
SMPD4Q9NXE4 SNORD18A-201ENST00000363753 72 ntBASIC1.14□□□□□ -2.23
SMPD4Q9NXE4 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
SMPD4Q9NXE4 MIR618-201ENST00000385287 98 ntBASIC1.14□□□□□ -2.23
SMPD4Q9NXE4 SNORA75.1-201ENST00000391130 148 ntBASIC1.14□□□□□ -2.23
SMPD4Q9NXE4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 RNA5SP117-201ENST00000365294 118 ntBASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 RNU6-716P-201ENST00000365621 103 ntBASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 RNU6-939P-201ENST00000384634 107 ntBASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 SNORD89-201ENST00000390981 114 ntBASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 RNU5B-6P-201ENST00000516765 68 ntBASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 RNA5SP47-201ENST00000517230 109 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 266.8 ms