Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC008737.2-201ENST00000599446 118 ntBASIC-1.16□□□□□ -2.6
APH1AQ96BI3 MIR6888-201ENST00000621977 67 ntBASIC-1.16□□□□□ -2.6
APH1AQ96BI3 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 MIR1263-201ENST00000408324 86 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 RNU7-197P-201ENST00000458836 62 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 AC021146.9-201ENST00000512503 156 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.17□□□□□ -2.6
APH1AQ96BI3 AC068339.1-201ENST00000526965 141 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 RNY1P9-201ENST00000532431 109 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.17□□□□□ -2.6
APH1AQ96BI3 AL445584.3-201ENST00000617173 78 ntBASIC-1.17□□□□□ -2.6
APH1AQ96BI3 SNORA63.2-201ENST00000362603 126 ntBASIC-1.18□□□□□ -2.6
APH1AQ96BI3 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.18□□□□□ -2.6
APH1AQ96BI3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.18□□□□□ -2.6
APH1AQ96BI3 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.18□□□□□ -2.6
APH1AQ96BI3 AL353803.5-201ENST00000599815 141 ntBASIC-1.18□□□□□ -2.6
APH1AQ96BI3 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.19□□□□□ -2.6
APH1AQ96BI3 SNORA20.1-201ENST00000364790 130 ntBASIC-1.19□□□□□ -2.6
APH1AQ96BI3 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.19□□□□□ -2.6
APH1AQ96BI3 RNU6-460P-201ENST00000391158 108 ntBASIC-1.19□□□□□ -2.6
APH1AQ96BI3 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.19□□□□□ -2.6
APH1AQ96BI3 RNU6-65P-201ENST00000516332 98 ntBASIC-1.19□□□□□ -2.6
APH1AQ96BI3 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.19□□□□□ -2.6
APH1AQ96BI3 MIR4536-1-201ENST00000583537 88 ntBASIC-1.19□□□□□ -2.6
APH1AQ96BI3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.19□□□□□ -2.6
APH1AQ96BI3 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.2□□□□□ -2.6
APH1AQ96BI3 RNU6-797P-201ENST00000363101 109 ntBASIC-1.2□□□□□ -2.6
APH1AQ96BI3 RNU6-915P-201ENST00000364943 103 ntBASIC-1.2□□□□□ -2.6
APH1AQ96BI3 RNU4-11P-201ENST00000365287 132 ntBASIC-1.2□□□□□ -2.6
APH1AQ96BI3 MIR606-201ENST00000384851 96 ntBASIC-1.2□□□□□ -2.6
APH1AQ96BI3 AL117351.2-201ENST00000513571 157 ntBASIC-1.2□□□□□ -2.6
APH1AQ96BI3 MIR3064-201ENST00000581130 66 ntBASIC-1.2□□□□□ -2.6
APH1AQ96BI3 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
APH1AQ96BI3 SNORD75.2-201ENST00000408784 58 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 AL513043.2-201ENST00000573941 143 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 MIR4306-201ENST00000583390 91 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 AC072026.1-201ENST00000605023 201 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 AC062037.2-201ENST00000610137 73 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 AC141273.2-201ENST00000618989 130 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 U6.96-201ENST00000636425 70 ntBASIC-1.21□□□□□ -2.6
APH1AQ96BI3 RNU6-816P-201ENST00000390914 107 ntBASIC-1.22□□□□□ -2.6
APH1AQ96BI3 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.22□□□□□ -2.6
APH1AQ96BI3 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.22□□□□□ -2.6
APH1AQ96BI3 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.22□□□□□ -2.6
APH1AQ96BI3 RNU6-746P-201ENST00000384112 109 ntBASIC-1.23□□□□□ -2.61
APH1AQ96BI3 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.23□□□□□ -2.61
APH1AQ96BI3 MIR548A1-201ENST00000385041 97 ntBASIC-1.23□□□□□ -2.61
APH1AQ96BI3 MIR577-201ENST00000385196 96 ntBASIC-1.23□□□□□ -2.61
APH1AQ96BI3 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.23□□□□□ -2.61
APH1AQ96BI3 SNORD90-201ENST00000391145 111 ntBASIC-1.23□□□□□ -2.61
APH1AQ96BI3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.23□□□□□ -2.61
APH1AQ96BI3 RNU6-781P-201ENST00000516377 101 ntBASIC-1.23□□□□□ -2.61
APH1AQ96BI3 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.23□□□□□ -2.61
APH1AQ96BI3 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.24□□□□□ -2.61
APH1AQ96BI3 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.24□□□□□ -2.61
APH1AQ96BI3 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.24□□□□□ -2.61
APH1AQ96BI3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.24□□□□□ -2.61
APH1AQ96BI3 snoU13.17-201ENST00000458802 104 ntBASIC-1.24□□□□□ -2.61
APH1AQ96BI3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.24□□□□□ -2.61
APH1AQ96BI3 SNORA81.3-201ENST00000517283 198 ntBASIC-1.24□□□□□ -2.61
APH1AQ96BI3 RNY4P6-201ENST00000363667 96 ntBASIC-1.25□□□□□ -2.61
APH1AQ96BI3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.25□□□□□ -2.61
APH1AQ96BI3 MIR1302-3-201ENST00000408128 138 ntBASIC-1.25□□□□□ -2.61
APH1AQ96BI3 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.25□□□□□ -2.61
APH1AQ96BI3 AC104996.3-201ENST00000590718 94 ntBASIC-1.25□□□□□ -2.61
APH1AQ96BI3 RNU6-151P-201ENST00000364158 107 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 SNORA33.1-201ENST00000364957 130 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 MIR29B1-201ENST00000385015 81 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 MTCYBP9-201ENST00000431021 303 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 SNORD63.1-201ENST00000516178 80 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 AP001094.1-201ENST00000579805 193 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 MIR3613-201ENST00000579844 87 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 MIR4324-201ENST00000584846 72 ntBASIC-1.26□□□□□ -2.61
APH1AQ96BI3 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.27□□□□□ -2.61
APH1AQ96BI3 MIR568-201ENST00000385036 95 ntBASIC-1.27□□□□□ -2.61
APH1AQ96BI3 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.27□□□□□ -2.61
APH1AQ96BI3 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.27□□□□□ -2.61
APH1AQ96BI3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.27□□□□□ -2.61
APH1AQ96BI3 AC132825.6-201ENST00000638861 357 ntBASIC-1.27□□□□□ -2.61
APH1AQ96BI3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.28□□□□□ -2.61
APH1AQ96BI3 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.28□□□□□ -2.61
APH1AQ96BI3 MIR548U-201ENST00000390728 81 ntBASIC-1.28□□□□□ -2.61
APH1AQ96BI3 RNA5SP292-201ENST00000390974 118 ntBASIC-1.28□□□□□ -2.61
APH1AQ96BI3 MIR1255B2-201ENST00000408618 67 ntBASIC-1.28□□□□□ -2.61
APH1AQ96BI3 RNU6-832P-201ENST00000363319 107 ntBASIC-1.29□□□□□ -2.62
APH1AQ96BI3 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.29□□□□□ -2.62
APH1AQ96BI3 RNU6-738P-201ENST00000384531 106 ntBASIC-1.29□□□□□ -2.62
APH1AQ96BI3 SNORA26.4-201ENST00000391188 123 ntBASIC-1.29□□□□□ -2.62
APH1AQ96BI3 AL158147.1-201ENST00000443970 75 ntBASIC-1.29□□□□□ -2.62
APH1AQ96BI3 SNORD4B-201ENST00000459083 72 ntBASIC-1.29□□□□□ -2.62
APH1AQ96BI3 RNA5SP67-201ENST00000516422 131 ntBASIC-1.29□□□□□ -2.62
APH1AQ96BI3 RNA5SP147-201ENST00000516493 109 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms