Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU6-990P-201ENST00000364385 104 ntBASIC1.7□□□□□ -2.14
CCDC116Q8IYX3 SNORD89-201ENST00000390981 114 ntBASIC1.7□□□□□ -2.14
CCDC116Q8IYX3 SNORA40.17-201ENST00000517256 115 ntBASIC1.7□□□□□ -2.14
CCDC116Q8IYX3 MIR4460-201ENST00000577862 86 ntBASIC1.7□□□□□ -2.14
CCDC116Q8IYX3 RNA5SP192-201ENST00000364404 120 ntBASIC1.69□□□□□ -2.14
CCDC116Q8IYX3 MIR499A-201ENST00000384903 122 ntBASIC1.69□□□□□ -2.14
CCDC116Q8IYX3 snoU13.31-201ENST00000607291 104 ntBASIC1.69□□□□□ -2.14
CCDC116Q8IYX3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC116Q8IYX3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC116Q8IYX3 SCARNA21.1-201ENST00000515996 128 ntBASIC1.68□□□□□ -2.14
CCDC116Q8IYX3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.68□□□□□ -2.14
CCDC116Q8IYX3 RNU6-656P-201ENST00000516785 107 ntBASIC1.68□□□□□ -2.14
CCDC116Q8IYX3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC116Q8IYX3 RNU6-829P-201ENST00000363700 112 ntBASIC1.67□□□□□ -2.14
CCDC116Q8IYX3 RNU6-726P-201ENST00000364680 107 ntBASIC1.67□□□□□ -2.14
CCDC116Q8IYX3 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
CCDC116Q8IYX3 SNORD105-201ENST00000386910 85 ntBASIC1.67□□□□□ -2.14
CCDC116Q8IYX3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.67□□□□□ -2.14
CCDC116Q8IYX3 RNA5SP299-201ENST00000391203 116 ntBASIC1.67□□□□□ -2.14
CCDC116Q8IYX3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.67□□□□□ -2.14
CCDC116Q8IYX3 RNU6-1079P-201ENST00000362861 110 ntBASIC1.66□□□□□ -2.14
CCDC116Q8IYX3 RNU1-17P-201ENST00000363022 152 ntBASIC1.66□□□□□ -2.14
CCDC116Q8IYX3 SNORD18A-201ENST00000363753 72 ntBASIC1.66□□□□□ -2.14
CCDC116Q8IYX3 SNORA25-201ENST00000384384 134 ntBASIC1.66□□□□□ -2.14
CCDC116Q8IYX3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CCDC116Q8IYX3 MIR6739-201ENST00000622461 75 ntBASIC1.66□□□□□ -2.14
CCDC116Q8IYX3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC116Q8IYX3 RNU6-940P-201ENST00000363433 104 ntBASIC1.65□□□□□ -2.15
CCDC116Q8IYX3 RNA5SP215-201ENST00000363440 122 ntBASIC1.65□□□□□ -2.15
CCDC116Q8IYX3 RNU1-141P-201ENST00000364623 158 ntBASIC1.65□□□□□ -2.15
CCDC116Q8IYX3 RNU6-716P-201ENST00000365621 103 ntBASIC1.65□□□□□ -2.15
CCDC116Q8IYX3 RNA5SP47-201ENST00000517230 109 ntBASIC1.65□□□□□ -2.15
CCDC116Q8IYX3 MIR466-201ENST00000580653 84 ntBASIC1.65□□□□□ -2.15
CCDC116Q8IYX3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC116Q8IYX3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC116Q8IYX3 snoU13.18-201ENST00000459483 104 ntBASIC1.64□□□□□ -2.15
CCDC116Q8IYX3 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
CCDC116Q8IYX3 RNA5SP327-201ENST00000362494 101 ntBASIC1.63□□□□□ -2.15
CCDC116Q8IYX3 FABP5P4-201ENST00000437203 171 ntBASIC1.63□□□□□ -2.15
CCDC116Q8IYX3 RNU6-1089P-201ENST00000516473 104 ntBASIC1.63□□□□□ -2.15
CCDC116Q8IYX3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
CCDC116Q8IYX3 MIR378A-201ENST00000362177 66 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 MIR489-201ENST00000384923 84 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 RNU6-321P-201ENST00000410912 106 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 AC108667.1-201ENST00000428618 249 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 U7.7-201ENST00000459276 60 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 AC018659.1-201ENST00000551083 169 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 MIR3678-201ENST00000578455 94 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 MIR8081-201ENST00000611533 95 ntBASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC116Q8IYX3 SNORD114-4-201ENST00000363962 75 ntBASIC1.61□□□□□ -2.15
CCDC116Q8IYX3 Y_RNA.236-201ENST00000364427 111 ntBASIC1.61□□□□□ -2.15
CCDC116Q8IYX3 RNU6-269P-201ENST00000391077 97 ntBASIC1.61□□□□□ -2.15
CCDC116Q8IYX3 RNU5B-6P-201ENST00000516765 68 ntBASIC1.61□□□□□ -2.15
CCDC116Q8IYX3 RNU1-92P-201ENST00000517017 135 ntBASIC1.61□□□□□ -2.15
CCDC116Q8IYX3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC116Q8IYX3 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
CCDC116Q8IYX3 MIR8070-201ENST00000616510 88 ntBASIC1.61□□□□□ -2.15
CCDC116Q8IYX3 Y_RNA.250-201ENST00000364542 110 ntBASIC1.59□□□□□ -2.15
CCDC116Q8IYX3 SNORA8.2-201ENST00000384372 139 ntBASIC1.59□□□□□ -2.15
CCDC116Q8IYX3 MIR573-201ENST00000384964 99 ntBASIC1.59□□□□□ -2.15
CCDC116Q8IYX3 RPS29P23-201ENST00000458635 123 ntBASIC1.59□□□□□ -2.15
CCDC116Q8IYX3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.59□□□□□ -2.15
CCDC116Q8IYX3 MIR3612-201ENST00000579753 87 ntBASIC1.59□□□□□ -2.15
CCDC116Q8IYX3 MIR548V-201ENST00000584165 80 ntBASIC1.59□□□□□ -2.15
CCDC116Q8IYX3 RNU6-302P-201ENST00000365249 107 ntBASIC1.58□□□□□ -2.16
CCDC116Q8IYX3 RNU6-1162P-201ENST00000384443 104 ntBASIC1.58□□□□□ -2.16
CCDC116Q8IYX3 RNA5SP484-201ENST00000458857 111 ntBASIC1.58□□□□□ -2.16
CCDC116Q8IYX3 AL157398.1-201ENST00000452981 186 ntBASIC1.57□□□□□ -2.16
CCDC116Q8IYX3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC116Q8IYX3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CCDC116Q8IYX3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC116Q8IYX3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CCDC116Q8IYX3 MIR521-2-201ENST00000384818 87 ntBASIC1.56□□□□□ -2.16
CCDC116Q8IYX3 snoU13.13-201ENST00000458842 104 ntBASIC1.56□□□□□ -2.16
CCDC116Q8IYX3 TRMT112P2-201ENST00000512910 132 ntBASIC1.56□□□□□ -2.16
CCDC116Q8IYX3 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
CCDC116Q8IYX3 RNU6-92P-201ENST00000605893 104 ntBASIC1.56□□□□□ -2.16
CCDC116Q8IYX3 MIR502-201ENST00000606349 86 ntBASIC1.56□□□□□ -2.16
CCDC116Q8IYX3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.56□□□□□ -2.16
CCDC116Q8IYX3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC116Q8IYX3 MIR548C-201ENST00000384815 97 ntBASIC1.55□□□□□ -2.16
CCDC116Q8IYX3 MIR19B1-201ENST00000384829 87 ntBASIC1.55□□□□□ -2.16
CCDC116Q8IYX3 RNU6-122P-201ENST00000516818 107 ntBASIC1.55□□□□□ -2.16
CCDC116Q8IYX3 SNORD124-201ENST00000459577 104 ntBASIC1.54□□□□□ -2.16
CCDC116Q8IYX3 RNU6-446P-201ENST00000362827 106 ntBASIC1.53□□□□□ -2.16
CCDC116Q8IYX3 SNORA75.1-201ENST00000391130 148 ntBASIC1.53□□□□□ -2.16
CCDC116Q8IYX3 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
CCDC116Q8IYX3 AC021146.9-201ENST00000512503 156 ntBASIC1.53□□□□□ -2.16
CCDC116Q8IYX3 AL162376.1-201ENST00000624117 175 ntBASIC1.53□□□□□ -2.16
CCDC116Q8IYX3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.52□□□□□ -2.17
CCDC116Q8IYX3 MIR200A-201ENST00000384875 90 ntBASIC1.52□□□□□ -2.17
CCDC116Q8IYX3 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
CCDC116Q8IYX3 MIR630-201ENST00000384957 97 ntBASIC1.51□□□□□ -2.17
CCDC116Q8IYX3 MIR3938-201ENST00000582157 103 ntBASIC1.51□□□□□ -2.17
CCDC116Q8IYX3 MIR6828-201ENST00000636181 60 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms