Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 SEPT14P3-201ENST00000439401 183 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AL732372.2-207ENST00000445840 183 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.84□□□□□ -2.54
ABCA4P78363 SEPT14P2-201ENST00000453405 183 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 RNU6-764P-201ENST00000516396 105 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 FO082796.1-201ENST00000523795 183 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 MIR4509-3-201ENST00000578671 94 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 MIR4509-2-201ENST00000583920 94 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AL022161.1-201ENST00000604390 213 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AC093424.1-201ENST00000604999 338 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AC037487.3-201ENST00000606668 112 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AC107308.1-201ENST00000615897 301 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AL137067.1-201ENST00000615933 120 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 MIR4509-1-201ENST00000618224 94 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AC073869.6-201ENST00000640656 341 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 RNU6-912P-201ENST00000363800 104 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 RNU6-340P-201ENST00000364005 107 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 RNU1-115P-201ENST00000365329 160 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 SNORD50.2-201ENST00000365465 70 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 SNORA26.8-201ENST00000391306 124 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AC024067.1-201ENST00000426199 223 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.84□□□□□ -2.54
ABCA4P78363 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 FGF7P7-201ENST00000514120 227 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 RNU6-358P-201ENST00000516564 75 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 RNU6-232P-201ENST00000517144 64 ntBASIC-0.84□□□□□ -2.54
ABCA4P78363 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 MIR577-201ENST00000385196 96 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 SNORD115-46-201ENST00000390982 71 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 RNU6-460P-201ENST00000391158 108 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.85□□□□□ -2.54
ABCA4P78363 MIR513C-201ENST00000401352 84 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 MTCO2P24-201ENST00000515611 426 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 SNORD63.2-201ENST00000516303 64 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.85□□□□□ -2.54
ABCA4P78363 SNORD45.1-201ENST00000363181 77 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 RNY4P9-201ENST00000363194 97 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 RNU6-593P-201ENST00000364716 112 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 RNU6-643P-201ENST00000384018 107 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 AC009161.1-201ENST00000417306 376 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 SNORD2.1-201ENST00000458762 69 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 SNORD4B-201ENST00000459083 72 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 MIR8062-201ENST00000621515 85 ntBASIC-0.85□□□□□ -2.55
ABCA4P78363 RNU6-834P-201ENST00000362367 110 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 RNU4-90P-201ENST00000362773 141 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 RNU6-451P-201ENST00000362921 107 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 RNU6-306P-201ENST00000384617 107 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 RNU6-493P-201ENST00000391321 108 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 RNY3P8-201ENST00000411366 126 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 AF228730.3-201ENST00000436691 102 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 AC103591.3-201ENST00000608684 209 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 AL691482.2-201ENST00000457453 84 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 RNU6-408P-201ENST00000515910 100 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 RNU6-521P-201ENST00000516663 105 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 AC109635.3-201ENST00000529536 185 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 MIR4790-201ENST00000577799 79 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 MIR3646-201ENST00000578301 84 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 VN1R91P-201ENST00000594377 169 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 SNORD113-5-201ENST00000607261 78 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 AL132765.2-201ENST00000610812 351 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 AL512310.12-203ENST00000640543 90 ntBASIC-0.86□□□□□ -2.55
ABCA4P78363 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.87□□□□□ -2.55
ABCA4P78363 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.87□□□□□ -2.55
ABCA4P78363 SNORA24B-201ENST00000384176 131 ntBASIC-0.87□□□□□ -2.55
ABCA4P78363 RNU6-240P-201ENST00000516098 97 ntBASIC-0.87□□□□□ -2.55
ABCA4P78363 RNU6-277P-201ENST00000516272 106 ntBASIC-0.87□□□□□ -2.55
ABCA4P78363 RNU6-523P-201ENST00000516304 54 ntBASIC-0.87□□□□□ -2.55
ABCA4P78363 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.87□□□□□ -2.55
ABCA4P78363 RNU6-570P-201ENST00000517051 105 ntBASIC-0.87□□□□□ -2.55
ABCA4P78363 MIR5701-3-201ENST00000578890 82 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms