Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNU6-540P-201ENST00000384622 101 ntBASIC-2.92□□□□□ -2.88
TPM4P67936 AC139792.2-201ENST00000624218 587 ntBASIC-2.92□□□□□ -2.88
TPM4P67936 SNORD50.2-201ENST00000365465 70 ntBASIC-2.93□□□□□ -2.88
TPM4P67936 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.93□□□□□ -2.88
TPM4P67936 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.93□□□□□ -2.88
TPM4P67936 AC090616.4-201ENST00000448026 115 ntBASIC-2.93□□□□□ -2.88
TPM4P67936 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.93□□□□□ -2.88
TPM4P67936 RNU6-168P-201ENST00000516189 101 ntBASIC-2.93□□□□□ -2.88
TPM4P67936 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.94□□□□□ -2.88
TPM4P67936 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.94□□□□□ -2.88
TPM4P67936 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.94□□□□□ -2.88
TPM4P67936 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.94□□□□□ -2.88
TPM4P67936 SNORD19-201ENST00000391191 68 ntBASIC-2.94□□□□□ -2.88
TPM4P67936 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.94□□□□□ -2.88
TPM4P67936 AC025521.1-201ENST00000621624 286 ntBASIC-2.94□□□□□ -2.88
TPM4P67936 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.95□□□□□ -2.88
TPM4P67936 RNY4P28-201ENST00000365281 93 ntBASIC-2.95□□□□□ -2.88
TPM4P67936 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.95□□□□□ -2.88
TPM4P67936 MIR548D2-201ENST00000384955 97 ntBASIC-2.95□□□□□ -2.88
TPM4P67936 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.95□□□□□ -2.88
TPM4P67936 CYP3A54P-201ENST00000566950 75 ntBASIC-2.95□□□□□ -2.88
TPM4P67936 RNU6-774P-201ENST00000363238 107 ntBASIC-2.96□□□□□ -2.88
TPM4P67936 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.96□□□□□ -2.88
TPM4P67936 RNU6-132P-201ENST00000383863 107 ntBASIC-2.96□□□□□ -2.88
TPM4P67936 RPL35AP4-201ENST00000412007 102 ntBASIC-2.96□□□□□ -2.88
TPM4P67936 snoU13.17-201ENST00000458802 104 ntBASIC-2.96□□□□□ -2.88
TPM4P67936 RNU7-85P-201ENST00000458851 63 ntBASIC-2.96□□□□□ -2.88
TPM4P67936 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.96□□□□□ -2.88
TPM4P67936 RNU6-988P-201ENST00000519081 107 ntBASIC-2.96□□□□□ -2.88
TPM4P67936 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.97□□□□□ -2.88
TPM4P67936 RNY1P11-201ENST00000363759 113 ntBASIC-2.97□□□□□ -2.88
TPM4P67936 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.97□□□□□ -2.88
TPM4P67936 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.97□□□□□ -2.88
TPM4P67936 MIR548U-201ENST00000390728 81 ntBASIC-2.97□□□□□ -2.88
TPM4P67936 RNU6-732P-201ENST00000516033 103 ntBASIC-2.97□□□□□ -2.88
TPM4P67936 SNORD18.1-201ENST00000363807 70 ntBASIC-2.98□□□□□ -2.89
TPM4P67936 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.98□□□□□ -2.89
TPM4P67936 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.98□□□□□ -2.89
TPM4P67936 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.98□□□□□ -2.89
TPM4P67936 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.99□□□□□ -2.89
TPM4P67936 MIR487B-201ENST00000385021 84 ntBASIC-2.99□□□□□ -2.89
TPM4P67936 MIR5683-201ENST00000636514 76 ntBASIC-2.99□□□□□ -2.89
TPM4P67936 RNU6-260P-201ENST00000384092 107 ntBASIC-3□□□□□ -2.89
TPM4P67936 Y_RNA.558-201ENST00000384685 113 ntBASIC-3□□□□□ -2.89
TPM4P67936 Y_RNA.277-201ENST00000364754 102 ntBASIC-3.01□□□□□ -2.89
TPM4P67936 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.01□□□□□ -2.89
TPM4P67936 MT-TW-201ENST00000387382 68 ntBASIC-3.01□□□□□ -2.89
TPM4P67936 RNA5SP147-201ENST00000516493 109 ntBASIC-3.01□□□□□ -2.89
TPM4P67936 MIR1285-2-201ENST00000408311 88 ntBASIC-3.02□□□□□ -2.89
TPM4P67936 MIR3064-201ENST00000581130 66 ntBASIC-3.02□□□□□ -2.89
TPM4P67936 MIR4490-201ENST00000582647 84 ntBASIC-3.02□□□□□ -2.89
TPM4P67936 U6atac.1-201ENST00000616025 117 ntBASIC-3.02□□□□□ -2.89
TPM4P67936 RNU7-154P-201ENST00000516194 62 ntBASIC-3.03□□□□□ -2.89
TPM4P67936 AC006254.2-201ENST00000603259 279 ntBASIC-3.03□□□□□ -2.89
TPM4P67936 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.04□□□□□ -2.9
TPM4P67936 RNU6-983P-201ENST00000516004 103 ntBASIC-3.04□□□□□ -2.9
TPM4P67936 Y_RNA.163-201ENST00000363702 113 ntBASIC-3.05□□□□□ -2.9
TPM4P67936 Y_RNA.181-201ENST00000363872 101 ntBASIC-3.05□□□□□ -2.9
TPM4P67936 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.05□□□□□ -2.9
TPM4P67936 SNORD115-27-201ENST00000364430 82 ntBASIC-3.05□□□□□ -2.9
TPM4P67936 MIR519A2-201ENST00000384990 87 ntBASIC-3.05□□□□□ -2.9
TPM4P67936 RNU6-400P-201ENST00000391173 106 ntBASIC-3.05□□□□□ -2.9
TPM4P67936 RNU6-713P-201ENST00000384761 107 ntBASIC-3.06□□□□□ -2.9
TPM4P67936 RNA5SP136-201ENST00000410906 107 ntBASIC-3.06□□□□□ -2.9
TPM4P67936 AC104996.3-201ENST00000590718 94 ntBASIC-3.06□□□□□ -2.9
TPM4P67936 Y_RNA.223-201ENST00000364290 113 ntBASIC-3.07□□□□□ -2.9
TPM4P67936 Y_RNA.457-201ENST00000384237 111 ntBASIC-3.07□□□□□ -2.9
TPM4P67936 MIR4680-201ENST00000580906 66 ntBASIC-3.07□□□□□ -2.9
TPM4P67936 RNU6-79P-201ENST00000362511 107 ntBASIC-3.08□□□□□ -2.9
TPM4P67936 RNU6-382P-201ENST00000365181 106 ntBASIC-3.08□□□□□ -2.9
TPM4P67936 SNORD37.2-201ENST00000391075 66 ntBASIC-3.08□□□□□ -2.9
TPM4P67936 RNU7-88P-201ENST00000458752 63 ntBASIC-3.08□□□□□ -2.9
TPM4P67936 SNORD127-201ENST00000458892 86 ntBASIC-3.08□□□□□ -2.9
TPM4P67936 AL513043.2-201ENST00000573941 143 ntBASIC-3.08□□□□□ -2.9
TPM4P67936 RNU6-312P-201ENST00000364629 107 ntBASIC-3.09□□□□□ -2.9
TPM4P67936 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.09□□□□□ -2.9
TPM4P67936 Y_RNA.491-201ENST00000384417 107 ntBASIC-3.09□□□□□ -2.9
TPM4P67936 MIR548P-201ENST00000408336 84 ntBASIC-3.09□□□□□ -2.9
TPM4P67936 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.09□□□□□ -2.9
TPM4P67936 RNU6-875P-201ENST00000516488 106 ntBASIC-3.09□□□□□ -2.9
TPM4P67936 MIR3121-201ENST00000579680 77 ntBASIC-3.09□□□□□ -2.9
TPM4P67936 MIR548AG1-201ENST00000579932 66 ntBASIC-3.09□□□□□ -2.9
TPM4P67936 U6.104-201ENST00000637979 90 ntBASIC-3.09□□□□□ -2.9
TPM4P67936 RNU6-228P-201ENST00000362700 106 ntBASIC-3.1□□□□□ -2.91
TPM4P67936 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.1□□□□□ -2.91
TPM4P67936 MIR203A-201ENST00000384836 110 ntBASIC-3.1□□□□□ -2.91
TPM4P67936 U7.5-201ENST00000517224 61 ntBASIC-3.1□□□□□ -2.91
TPM4P67936 RNU6-474P-201ENST00000384243 107 ntBASIC-3.11□□□□□ -2.91
TPM4P67936 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.11□□□□□ -2.91
TPM4P67936 RNU6-246P-201ENST00000384702 107 ntBASIC-3.11□□□□□ -2.91
TPM4P67936 AC018880.2-201ENST00000414265 201 ntBASIC-3.11□□□□□ -2.91
TPM4P67936 MIR4795-201ENST00000584182 89 ntBASIC-3.11□□□□□ -2.91
TPM4P67936 Y_RNA.348-201ENST00000365403 103 ntBASIC-3.12□□□□□ -2.91
TPM4P67936 MIR1302-6-201ENST00000408466 90 ntBASIC-3.12□□□□□ -2.91
TPM4P67936 RNA5SP272-201ENST00000516095 111 ntBASIC-3.12□□□□□ -2.91
TPM4P67936 RNU6-62P-201ENST00000516526 102 ntBASIC-3.12□□□□□ -2.91
TPM4P67936 MIR6509-201ENST00000614603 85 ntBASIC-3.12□□□□□ -2.91
TPM4P67936 RNU6-816P-201ENST00000390914 107 ntBASIC-3.13□□□□□ -2.91
TPM4P67936 RNU6-1268P-201ENST00000391214 107 ntBASIC-3.13□□□□□ -2.91
TPM4P67936 RNU6-1239P-201ENST00000391310 107 ntBASIC-3.13□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms