Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PTCD1O75127 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
PTCD1O75127 Y_RNA.32-201ENST00000362589 110 ntBASIC1.73□□□□□ -2.13
PTCD1O75127 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.73□□□□□ -2.13
PTCD1O75127 SNORD75.2-201ENST00000408784 58 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 AL691482.2-201ENST00000457453 84 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 RNU6-752P-201ENST00000516376 102 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 SNORA40.17-201ENST00000517256 115 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-495P-201ENST00000362995 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-54P-201ENST00000365563 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-1039P-201ENST00000383931 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-1126P-201ENST00000384002 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-614P-201ENST00000384369 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 U3.27-201ENST00000391237 200 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU7-56P-201ENST00000458744 62 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 SNORA31.14-201ENST00000516728 116 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-1057P-201ENST00000517162 102 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU7-161P-201ENST00000517289 62 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 U6.59-201ENST00000615686 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 AC069503.3-201ENST00000618674 145 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 AC092634.7-201ENST00000621022 103 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-1079P-201ENST00000362861 110 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PTCD1O75127 MIR1827-201ENST00000408549 66 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 RNA5SP61-201ENST00000516453 100 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 MIR3920-201ENST00000581751 86 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 MIR3660-201ENST00000584845 100 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 RNA5SP403-201ENST00000363598 108 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 SNORD114-27-201ENST00000363766 70 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 Y_RNA.236-201ENST00000364427 111 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 SNORD42B-201ENST00000458893 67 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 uc_338.16-201ENST00000621804 95 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 RNU7-13P-201ENST00000516413 62 ntBASIC1.68□□□□□ -2.14
PTCD1O75127 MIR6509-201ENST00000614603 85 ntBASIC1.68□□□□□ -2.14
PTCD1O75127 RNU6-446P-201ENST00000362827 106 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 SNORD115-24-201ENST00000363528 82 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 RNA5SP192-201ENST00000364404 120 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 Y_RNA.375-201ENST00000365625 101 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 RNU7-24P-201ENST00000458867 62 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PTCD1O75127 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
PTCD1O75127 SNORD89-201ENST00000390981 114 ntBASIC1.66□□□□□ -2.14
PTCD1O75127 RMST_2.1-201ENST00000617263 136 ntBASIC1.66□□□□□ -2.14
PTCD1O75127 RNU6-668P-201ENST00000364180 107 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 SNORD115-44-201ENST00000365391 82 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 MIR519E-201ENST00000385075 84 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
PTCD1O75127 MIR3657-201ENST00000584818 117 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 MIR548O2-201ENST00000616090 70 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 AC073869.9-201ENST00000641610 120 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 RNU6-990P-201ENST00000364385 104 ntBASIC1.64□□□□□ -2.15
PTCD1O75127 RNU6-645P-201ENST00000364649 106 ntBASIC1.64□□□□□ -2.15
PTCD1O75127 RNU7-104P-201ENST00000459398 79 ntBASIC1.64□□□□□ -2.15
PTCD1O75127 RNU6-42P-201ENST00000384165 107 ntBASIC1.63□□□□□ -2.15
PTCD1O75127 AL136317.1-201ENST00000612653 226 ntBASIC1.63□□□□□ -2.15
PTCD1O75127 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.62□□□□□ -2.15
PTCD1O75127 SNORA25.5-201ENST00000363782 126 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 RNU1-93P-201ENST00000364704 169 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 SNORD113-4-201ENST00000364802 75 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 FABP5P4-201ENST00000437203 171 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 MIR466-201ENST00000580653 84 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 MIR6734-201ENST00000621166 68 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 MIR7978-201ENST00000636158 59 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 RNU6V-201ENST00000384105 107 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 SNORD26-201ENST00000384147 75 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 RNA5SP220-201ENST00000516298 104 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 RNU6-542P-201ENST00000516405 103 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 RNA5SP147-201ENST00000516493 109 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 MIR26B-201ENST00000362251 77 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 MIR617-201ENST00000385030 97 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 SNORA75.1-201ENST00000391130 148 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 MTND4LP1-201ENST00000446263 157 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 SNORD124-201ENST00000459577 104 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 SCARNA21.1-201ENST00000515996 128 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 RNU6-656P-201ENST00000516785 107 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 AC068338.1-201ENST00000565567 176 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.6□□□□□ -2.15
PTCD1O75127 SNORA25.8-201ENST00000364831 128 ntBASIC1.59□□□□□ -2.15
PTCD1O75127 MIR520E-201ENST00000384867 87 ntBASIC1.59□□□□□ -2.15
PTCD1O75127 RNA5SP299-201ENST00000391203 116 ntBASIC1.59□□□□□ -2.15
PTCD1O75127 MIR19B1-201ENST00000384829 87 ntBASIC1.58□□□□□ -2.16
PTCD1O75127 MIR644A-201ENST00000385262 94 ntBASIC1.58□□□□□ -2.16
PTCD1O75127 RNU6-1110P-201ENST00000516462 101 ntBASIC1.58□□□□□ -2.16
PTCD1O75127 RNU6-260P-201ENST00000384092 107 ntBASIC1.57□□□□□ -2.16
PTCD1O75127 U7.7-201ENST00000459276 60 ntBASIC1.57□□□□□ -2.16
PTCD1O75127 RPS29P1-201ENST00000465274 159 ntBASIC1.57□□□□□ -2.16
PTCD1O75127 MIR6767-201ENST00000637302 66 ntBASIC1.57□□□□□ -2.16
PTCD1O75127 Y_RNA.174-201ENST00000363781 105 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 RNA5SP117-201ENST00000365294 118 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 SNORD105-201ENST00000386910 85 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 MIR758-201ENST00000390227 88 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 RPS29P23-201ENST00000458635 123 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 MIR200A-201ENST00000384875 90 ntBASIC1.55□□□□□ -2.16
PTCD1O75127 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PTCD1O75127 snoU13.13-201ENST00000458842 104 ntBASIC1.53□□□□□ -2.16
PTCD1O75127 AC067863.3-201ENST00000624172 122 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms