Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TSR3Q9UJK0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
TSR3Q9UJK0 MIR1-1-201ENST00000362147 71 ntBASIC2.13□□□□□ -2.07
TSR3Q9UJK0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.13□□□□□ -2.07
TSR3Q9UJK0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.13□□□□□ -2.07
TSR3Q9UJK0 U2.7-201ENST00000619197 100 ntBASIC2.13□□□□□ -2.07
TSR3Q9UJK0 U4.4-201ENST00000620626 117 ntBASIC2.13□□□□□ -2.07
TSR3Q9UJK0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TSR3Q9UJK0 RN7SKP88-201ENST00000516847 250 ntBASIC2.12□□□□□ -2.07
TSR3Q9UJK0 7SK.8-201ENST00000612110 250 ntBASIC2.12□□□□□ -2.07
TSR3Q9UJK0 7SK.11-201ENST00000615477 250 ntBASIC2.12□□□□□ -2.07
TSR3Q9UJK0 7SK.13-201ENST00000622040 250 ntBASIC2.12□□□□□ -2.07
TSR3Q9UJK0 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
TSR3Q9UJK0 MIR30A-201ENST00000385092 71 ntBASIC2.11□□□□□ -2.07
TSR3Q9UJK0 MIR644A-201ENST00000385262 94 ntBASIC2.11□□□□□ -2.07
TSR3Q9UJK0 SNORD41.1-201ENST00000391000 69 ntBASIC2.11□□□□□ -2.07
TSR3Q9UJK0 SNORA44.1-201ENST00000517031 108 ntBASIC2.11□□□□□ -2.07
TSR3Q9UJK0 MIR4448-201ENST00000584360 86 ntBASIC2.11□□□□□ -2.07
TSR3Q9UJK0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.11□□□□□ -2.07
TSR3Q9UJK0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TSR3Q9UJK0 SNORD114-4-201ENST00000363962 75 ntBASIC2.1□□□□□ -2.07
TSR3Q9UJK0 AP000553.5-201ENST00000641933 54 ntBASIC2.1□□□□□ -2.07
TSR3Q9UJK0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
TSR3Q9UJK0 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
TSR3Q9UJK0 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
TSR3Q9UJK0 SNORA3.2-201ENST00000408221 125 ntBASIC2.09□□□□□ -2.07
TSR3Q9UJK0 AC104435.1-201ENST00000483483 166 ntBASIC2.09□□□□□ -2.07
TSR3Q9UJK0 AC021146.9-201ENST00000512503 156 ntBASIC2.09□□□□□ -2.07
TSR3Q9UJK0 MIR3198-2-201ENST00000577868 80 ntBASIC2.09□□□□□ -2.07
TSR3Q9UJK0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.09□□□□□ -2.07
TSR3Q9UJK0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
TSR3Q9UJK0 SNORA7.1-201ENST00000363750 139 ntBASIC2.08□□□□□ -2.08
TSR3Q9UJK0 SNORA80D-201ENST00000384488 135 ntBASIC2.08□□□□□ -2.08
TSR3Q9UJK0 MIR548L-201ENST00000408303 86 ntBASIC2.08□□□□□ -2.08
TSR3Q9UJK0 RNU7-90P-201ENST00000459216 62 ntBASIC2.08□□□□□ -2.08
TSR3Q9UJK0 RNU6-980P-201ENST00000516925 103 ntBASIC2.08□□□□□ -2.08
TSR3Q9UJK0 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.08□□□□□ -2.08
TSR3Q9UJK0 AC244669.1-204ENST00000621564 178 ntBASIC2.08□□□□□ -2.08
TSR3Q9UJK0 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
TSR3Q9UJK0 RNU6-301P-201ENST00000384277 107 ntBASIC2.07□□□□□ -2.08
TSR3Q9UJK0 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
TSR3Q9UJK0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TSR3Q9UJK0 RNU7-119P-201ENST00000459279 63 ntBASIC2.07□□□□□ -2.08
TSR3Q9UJK0 RNU5B-6P-201ENST00000516765 68 ntBASIC2.07□□□□□ -2.08
TSR3Q9UJK0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TSR3Q9UJK0 RNU1-141P-201ENST00000364623 158 ntBASIC2.06□□□□□ -2.08
TSR3Q9UJK0 RNU6-910P-201ENST00000390844 107 ntBASIC2.06□□□□□ -2.08
TSR3Q9UJK0 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
TSR3Q9UJK0 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
TSR3Q9UJK0 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
TSR3Q9UJK0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.06□□□□□ -2.08
TSR3Q9UJK0 RMST_2.1-201ENST00000617263 136 ntBASIC2.06□□□□□ -2.08
TSR3Q9UJK0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.05□□□□□ -2.08
TSR3Q9UJK0 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
TSR3Q9UJK0 MIR4639-201ENST00000584938 69 ntBASIC2.05□□□□□ -2.08
TSR3Q9UJK0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.05□□□□□ -2.08
TSR3Q9UJK0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TSR3Q9UJK0 SNORA33.1-201ENST00000364957 130 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 RNU6-35P-201ENST00000384530 107 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 SNORD28-201ENST00000384706 75 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 SNORA41B-201ENST00000384785 128 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 MIR1827-201ENST00000408549 66 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 RN7SKP223-201ENST00000410582 62 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 AC002350.1-201ENST00000490759 375 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 RNU6-135P-201ENST00000516769 101 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
TSR3Q9UJK0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.04□□□□□ -2.08
TSR3Q9UJK0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TSR3Q9UJK0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TSR3Q9UJK0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TSR3Q9UJK0 Y_RNA.125-201ENST00000363371 111 ntBASIC2.03□□□□□ -2.08
TSR3Q9UJK0 SNORA15B-2-201ENST00000384058 135 ntBASIC2.03□□□□□ -2.08
TSR3Q9UJK0 SNORA15B-1-201ENST00000384334 135 ntBASIC2.03□□□□□ -2.08
TSR3Q9UJK0 AC008834.1-201ENST00000511612 175 ntBASIC2.03□□□□□ -2.08
TSR3Q9UJK0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.03□□□□□ -2.08
TSR3Q9UJK0 RNA5SP425-201ENST00000410336 112 ntBASIC2.02□□□□□ -2.09
TSR3Q9UJK0 SNORD79.1-201ENST00000516069 84 ntBASIC2.02□□□□□ -2.09
TSR3Q9UJK0 RNU6-231P-201ENST00000517122 103 ntBASIC2.02□□□□□ -2.09
TSR3Q9UJK0 RNU6-726P-201ENST00000364680 107 ntBASIC2.01□□□□□ -2.09
TSR3Q9UJK0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.01□□□□□ -2.09
TSR3Q9UJK0 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
TSR3Q9UJK0 Y_RNA.633-201ENST00000459107 95 ntBASIC2.01□□□□□ -2.09
TSR3Q9UJK0 MIR1273D-201ENST00000577266 86 ntBASIC2.01□□□□□ -2.09
TSR3Q9UJK0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
TSR3Q9UJK0 Y_RNA.246-201ENST00000364495 108 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 AL356320.1-201ENST00000429616 163 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 RN7SL429P-201ENST00000479090 223 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 RN7SL489P-201ENST00000486185 223 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 RN7SL327P-201ENST00000488659 223 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 RNU6-469P-201ENST00000516253 101 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 RNU6-548P-201ENST00000517083 115 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 MIR4781-201ENST00000585250 76 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 RN7SL853P-201ENST00000617250 223 ntBASIC2□□□□□ -2.09
TSR3Q9UJK0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TSR3Q9UJK0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TSR3Q9UJK0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TSR3Q9UJK0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 296.7 ms