Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.48□□□□□ -2.49
CXCL12P48061 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.48□□□□□ -2.49
CXCL12P48061 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.48□□□□□ -2.49
CXCL12P48061 AL158147.1-201ENST00000443970 75 ntBASIC-0.48□□□□□ -2.49
CXCL12P48061 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
CXCL12P48061 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.48□□□□□ -2.49
CXCL12P48061 RNA5SP67-201ENST00000516422 131 ntBASIC-0.48□□□□□ -2.49
CXCL12P48061 AC004792.1-201ENST00000614523 137 ntBASIC-0.48□□□□□ -2.49
CXCL12P48061 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.48□□□□□ -2.49
CXCL12P48061 MIR409-201ENST00000362237 79 ntBASIC-0.49□□□□□ -2.49
CXCL12P48061 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.49□□□□□ -2.49
CXCL12P48061 SNORD114-11-201ENST00000363738 75 ntBASIC-0.49□□□□□ -2.49
CXCL12P48061 RNA5SP331-201ENST00000364986 107 ntBASIC-0.49□□□□□ -2.49
CXCL12P48061 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.49□□□□□ -2.49
CXCL12P48061 RNU6-394P-201ENST00000410735 107 ntBASIC-0.49□□□□□ -2.49
CXCL12P48061 MIR548X2-201ENST00000579776 100 ntBASIC-0.49□□□□□ -2.49
CXCL12P48061 SNORD14C-201ENST00000365382 88 ntBASIC-0.5□□□□□ -2.49
CXCL12P48061 RNU6-409P-201ENST00000384114 104 ntBASIC-0.5□□□□□ -2.49
CXCL12P48061 RNU6-804P-201ENST00000384286 107 ntBASIC-0.5□□□□□ -2.49
CXCL12P48061 RNU6-455P-201ENST00000384681 107 ntBASIC-0.5□□□□□ -2.49
CXCL12P48061 MIR652-201ENST00000385278 98 ntBASIC-0.5□□□□□ -2.49
CXCL12P48061 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.5□□□□□ -2.49
CXCL12P48061 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.5□□□□□ -2.49
CXCL12P48061 AC007012.1-201ENST00000567192 175 ntBASIC-0.5□□□□□ -2.49
CXCL12P48061 MIR20A-201ENST00000362279 71 ntBASIC-0.51□□□□□ -2.49
CXCL12P48061 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.51□□□□□ -2.49
CXCL12P48061 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.51□□□□□ -2.49
CXCL12P48061 MIR4696-201ENST00000581431 70 ntBASIC-0.51□□□□□ -2.49
CXCL12P48061 AC099654.10-201ENST00000640395 161 ntBASIC-0.51□□□□□ -2.49
CXCL12P48061 RNA5SP275-201ENST00000363936 118 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 SNORD101-201ENST00000384027 73 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 MIR196A2-201ENST00000385189 110 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
CXCL12P48061 RNU6-466P-201ENST00000391224 103 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 AC096531.1-201ENST00000419107 107 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 snoU13.11-201ENST00000459219 104 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 AC096720.1-201ENST00000604441 183 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 AL442128.1-201ENST00000615151 90 ntBASIC-0.52□□□□□ -2.49
CXCL12P48061 RNU6-664P-201ENST00000362381 107 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 RNY4P6-201ENST00000363667 96 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 RNU6-480P-201ENST00000384332 107 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 RNU6-816P-201ENST00000390914 107 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 RNA5SP272-201ENST00000516095 111 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 MIR3144-201ENST00000579460 79 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 U7.2-201ENST00000607576 63 ntBASIC-0.53□□□□□ -2.49
CXCL12P48061 RNU6-235P-201ENST00000362644 107 ntBASIC-0.54□□□□□ -2.5
CXCL12P48061 MIR9-2-201ENST00000384838 87 ntBASIC-0.54□□□□□ -2.5
CXCL12P48061 MIR569-201ENST00000385228 96 ntBASIC-0.54□□□□□ -2.5
CXCL12P48061 AC244090.1-201ENST00000441884 93 ntBASIC-0.54□□□□□ -2.5
CXCL12P48061 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
CXCL12P48061 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.54□□□□□ -2.5
CXCL12P48061 AP000676.1-201ENST00000533307 52 ntBASIC-0.54□□□□□ -2.5
CXCL12P48061 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.55□□□□□ -2.5
CXCL12P48061 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.55□□□□□ -2.5
CXCL12P48061 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.55□□□□□ -2.5
CXCL12P48061 MT-TG-201ENST00000387429 68 ntBASIC-0.55□□□□□ -2.5
CXCL12P48061 RNU6-284P-201ENST00000411105 106 ntBASIC-0.55□□□□□ -2.5
CXCL12P48061 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.55□□□□□ -2.5
CXCL12P48061 RNA5SP66-201ENST00000517178 101 ntBASIC-0.55□□□□□ -2.5
CXCL12P48061 AC025166.1-201ENST00000612411 163 ntBASIC-0.55□□□□□ -2.5
CXCL12P48061 MIR548O2-201ENST00000616090 70 ntBASIC-0.55□□□□□ -2.5
CXCL12P48061 MTND5P18-201ENST00000445624 1801 ntBASIC-0.56□□□□□ -2.5
CXCL12P48061 SNORD58C-201ENST00000365223 64 ntBASIC-0.56□□□□□ -2.5
CXCL12P48061 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.56□□□□□ -2.5
CXCL12P48061 MIR216B-201ENST00000390186 82 ntBASIC-0.57□□□□□ -2.5
CXCL12P48061 RNU6-935P-201ENST00000410371 100 ntBASIC-0.57□□□□□ -2.5
CXCL12P48061 MTND5P41-201ENST00000517498 206 ntBASIC-0.57□□□□□ -2.5
CXCL12P48061 MIR4432-201ENST00000581823 84 ntBASIC-0.57□□□□□ -2.5
CXCL12P48061 MIR4719-201ENST00000585233 84 ntBASIC-0.57□□□□□ -2.5
CXCL12P48061 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.58□□□□□ -2.5
CXCL12P48061 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.58□□□□□ -2.5
CXCL12P48061 SNORA49-201ENST00000386157 136 ntBASIC-0.58□□□□□ -2.5
CXCL12P48061 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.58□□□□□ -2.5
CXCL12P48061 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.58□□□□□ -2.5
CXCL12P48061 RNU6-762P-201ENST00000517107 102 ntBASIC-0.58□□□□□ -2.5
CXCL12P48061 RNU6-54P-201ENST00000365563 107 ntBASIC-0.59□□□□□ -2.5
CXCL12P48061 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.59□□□□□ -2.5
CXCL12P48061 RNU6-900P-201ENST00000384498 102 ntBASIC-0.59□□□□□ -2.5
CXCL12P48061 MIR451A-201ENST00000385059 72 ntBASIC-0.59□□□□□ -2.5
CXCL12P48061 AL445193.1-201ENST00000441183 141 ntBASIC-0.59□□□□□ -2.5
CXCL12P48061 RNU6-426P-201ENST00000516464 97 ntBASIC-0.59□□□□□ -2.5
CXCL12P48061 MIR548AX-201ENST00000580117 73 ntBASIC-0.59□□□□□ -2.5
CXCL12P48061 FTX_2.1-201ENST00000618816 94 ntBASIC-0.59□□□□□ -2.5
CXCL12P48061 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.6□□□□□ -2.51
CXCL12P48061 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.6□□□□□ -2.51
CXCL12P48061 MIR577-201ENST00000385196 96 ntBASIC-0.6□□□□□ -2.51
CXCL12P48061 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.6□□□□□ -2.51
CXCL12P48061 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.6□□□□□ -2.51
CXCL12P48061 RNU6-75P-201ENST00000515944 104 ntBASIC-0.6□□□□□ -2.51
CXCL12P48061 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.6□□□□□ -2.51
CXCL12P48061 AC145423.2-201ENST00000610631 239 ntBASIC-0.6□□□□□ -2.51
CXCL12P48061 AC025521.1-201ENST00000621624 286 ntBASIC-0.6□□□□□ -2.51
CXCL12P48061 AC093726.3-201ENST00000637588 150 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms