Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MIR527-201ENST00000385244 85 ntBASIC-1.36□□□□□ -2.63
TRAV1-1A0A0B4J248 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.36□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR3140-201ENST00000583685 90 ntBASIC-1.36□□□□□ -2.63
TRAV1-1A0A0B4J248 AL137067.1-201ENST00000615933 120 ntBASIC-1.36□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU6-495P-201ENST00000362995 107 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU6-818P-201ENST00000364837 108 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 SNORD116-4-201ENST00000384733 96 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR29B1-201ENST00000385015 81 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU6-493P-201ENST00000391321 108 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU6-101P-201ENST00000410323 104 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 MTATP6P21-201ENST00000440681 189 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR4643-201ENST00000577473 78 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 AL512310.12-203ENST00000640543 90 ntBASIC-1.37□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 SNORD38.1-201ENST00000363863 68 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 SNORD115-22-201ENST00000364456 82 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU6-576P-201ENST00000390854 102 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 SNORA26.4-201ENST00000391188 123 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU4-61P-201ENST00000411243 107 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 AC021753.1-201ENST00000635724 168 ntBASIC-1.38□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.39□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.39□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.39□□□□□ -2.63
TRAV1-1A0A0B4J248 RNY3P1-201ENST00000365085 102 ntBASIC-1.39□□□□□ -2.63
TRAV1-1A0A0B4J248 HLA-S-202ENST00000425174 53 ntBASIC-1.39□□□□□ -2.63
TRAV1-1A0A0B4J248 AC026421.1-201ENST00000519101 163 ntBASIC-1.39□□□□□ -2.63
TRAV1-1A0A0B4J248 AC090971.5-201ENST00000621102 293 ntBASIC-1.39□□□□□ -2.63
TRAV1-1A0A0B4J248 RNA5SP26-201ENST00000362406 119 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR759-201ENST00000390224 91 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR1207-201ENST00000408249 87 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR548H3-201ENST00000408771 118 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR4520-1-201ENST00000582609 70 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR3149-201ENST00000584629 83 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 AC138207.3-201ENST00000585289 166 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR6874-201ENST00000635894 71 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR1246-201ENST00000636535 73 ntBASIC-1.4□□□□□ -2.63
TRAV1-1A0A0B4J248 SNORD115-33-201ENST00000363723 82 ntBASIC-1.41□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-132P-201ENST00000383863 107 ntBASIC-1.41□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.41□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR1255B2-201ENST00000408618 67 ntBASIC-1.41□□□□□ -2.64
TRAV1-1A0A0B4J248 AC025521.1-201ENST00000621624 286 ntBASIC-1.41□□□□□ -2.64
TRAV1-1A0A0B4J248 AC091912.2-201ENST00000624798 167 ntBASIC-1.41□□□□□ -2.64
TRAV1-1A0A0B4J248 SNORA33.1-201ENST00000364957 130 ntBASIC-1.42□□□□□ -2.64
TRAV1-1A0A0B4J248 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.42□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.42□□□□□ -2.64
TRAV1-1A0A0B4J248 RNA5SP147-201ENST00000516493 109 ntBASIC-1.42□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR5591-201ENST00000578248 65 ntBASIC-1.42□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR3163-201ENST00000581592 73 ntBASIC-1.42□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR6129-201ENST00000616087 109 ntBASIC-1.42□□□□□ -2.64
TRAV1-1A0A0B4J248 U6.106-201ENST00000636360 105 ntBASIC-1.42□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-275P-201ENST00000364910 107 ntBASIC-1.43□□□□□ -2.64
TRAV1-1A0A0B4J248 SNORA24B-201ENST00000384176 131 ntBASIC-1.43□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.43□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.43□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU7-85P-201ENST00000458851 63 ntBASIC-1.43□□□□□ -2.64
TRAV1-1A0A0B4J248 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.43□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR369-201ENST00000362155 70 ntBASIC-1.44□□□□□ -2.64
TRAV1-1A0A0B4J248 SNORA63.2-201ENST00000362603 126 ntBASIC-1.44□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-924P-201ENST00000362926 108 ntBASIC-1.44□□□□□ -2.64
TRAV1-1A0A0B4J248 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.44□□□□□ -2.64
TRAV1-1A0A0B4J248 SNORA75.5-201ENST00000391291 81 ntBASIC-1.44□□□□□ -2.64
TRAV1-1A0A0B4J248 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
TRAV1-1A0A0B4J248 snoU13.17-201ENST00000458802 104 ntBASIC-1.44□□□□□ -2.64
TRAV1-1A0A0B4J248 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.44□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR4536-1-201ENST00000583537 88 ntBASIC-1.44□□□□□ -2.64
TRAV1-1A0A0B4J248 RNY4P6-201ENST00000363667 96 ntBASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR548A1-201ENST00000385041 97 ntBASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR507-201ENST00000385234 94 ntBASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 MT-TW-201ENST00000387382 68 ntBASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-65P-201ENST00000516332 98 ntBASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.45□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-363P-201ENST00000362895 105 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-226P-201ENST00000363778 107 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 SNORD90-201ENST00000391145 111 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 SNORD75.2-201ENST00000408784 58 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms