Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.07□□□□□ -2.74
APOBP04114 RNU6-645P-201ENST00000364649 106 ntBASIC-2.07□□□□□ -2.74
APOBP04114 MTATP6P29-201ENST00000415057 132 ntBASIC-2.07□□□□□ -2.74
APOBP04114 AC009779.6-201ENST00000603972 165 ntBASIC-2.07□□□□□ -2.74
APOBP04114 RNU6-864P-201ENST00000516256 108 ntBASIC-2.08□□□□□ -2.74
APOBP04114 AL022161.1-201ENST00000604390 213 ntBASIC-2.08□□□□□ -2.74
APOBP04114 Y_RNA.24-201ENST00000362508 103 ntBASIC-2.08□□□□□ -2.74
APOBP04114 Y_RNA.72-201ENST00000362894 103 ntBASIC-2.08□□□□□ -2.74
APOBP04114 RNU6-801P-201ENST00000364087 105 ntBASIC-2.08□□□□□ -2.74
APOBP04114 RNU4-69P-201ENST00000410677 143 ntBASIC-2.08□□□□□ -2.74
APOBP04114 RPS29P25-201ENST00000481709 171 ntBASIC-2.08□□□□□ -2.74
APOBP04114 MIR5688-201ENST00000580619 83 ntBASIC-2.08□□□□□ -2.74
APOBP04114 U2.7-201ENST00000619197 100 ntBASIC-2.08□□□□□ -2.74
APOBP04114 AC006927.2-201ENST00000639256 389 ntBASIC-2.08□□□□□ -2.74
APOBP04114 AL356010.1-201ENST00000456364 102 ntBASIC-2.08□□□□□ -2.74
APOBP04114 RNU6-911P-201ENST00000516523 104 ntBASIC-2.08□□□□□ -2.74
APOBP04114 AC005014.2-201ENST00000607795 599 ntBASIC-2.08□□□□□ -2.74
APOBP04114 MIR548A3-201ENST00000385297 97 ntBASIC-2.08□□□□□ -2.74
APOBP04114 MIR1254-1-201ENST00000408257 97 ntBASIC-2.09□□□□□ -2.74
APOBP04114 AL593851.1-201ENST00000426171 157 ntBASIC-2.09□□□□□ -2.74
APOBP04114 SNORD78.2-201ENST00000391076 69 ntBASIC-2.09□□□□□ -2.74
APOBP04114 AL132765.2-201ENST00000610812 351 ntBASIC-2.09□□□□□ -2.74
APOBP04114 MIR4773-1-201ENST00000637203 78 ntBASIC-2.09□□□□□ -2.74
APOBP04114 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.09□□□□□ -2.74
APOBP04114 RNU5B-4P-201ENST00000363508 111 ntBASIC-2.09□□□□□ -2.74
APOBP04114 MTND4P7-201ENST00000523876 130 ntBASIC-2.09□□□□□ -2.74
APOBP04114 Y_RNA.557-201ENST00000384680 107 ntBASIC-2.1□□□□□ -2.75
APOBP04114 SNORD37.1-201ENST00000390968 65 ntBASIC-2.1□□□□□ -2.75
APOBP04114 MIR1270-201ENST00000459320 83 ntBASIC-2.1□□□□□ -2.75
APOBP04114 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.1□□□□□ -2.75
APOBP04114 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.1□□□□□ -2.75
APOBP04114 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.1□□□□□ -2.75
APOBP04114 MIR548AA1-201ENST00000384971 97 ntBASIC-2.1□□□□□ -2.75
APOBP04114 AC138393.2-201ENST00000414742 246 ntBASIC-2.1□□□□□ -2.75
APOBP04114 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-2.1□□□□□ -2.75
APOBP04114 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.11□□□□□ -2.75
APOBP04114 MIR3140-201ENST00000583685 90 ntBASIC-2.11□□□□□ -2.75
APOBP04114 RNU6-957P-201ENST00000363652 99 ntBASIC-2.11□□□□□ -2.75
APOBP04114 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.11□□□□□ -2.75
APOBP04114 AL691482.2-201ENST00000457453 84 ntBASIC-2.11□□□□□ -2.75
APOBP04114 RNU6-1299P-201ENST00000516316 100 ntBASIC-2.11□□□□□ -2.75
APOBP04114 RNU2-35P-201ENST00000516446 142 ntBASIC-2.11□□□□□ -2.75
APOBP04114 AL138825.1-201ENST00000618587 192 ntBASIC-2.11□□□□□ -2.75
APOBP04114 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.12□□□□□ -2.75
APOBP04114 RNU7-164P-201ENST00000459221 62 ntBASIC-2.12□□□□□ -2.75
APOBP04114 AC073869.6-201ENST00000640656 341 ntBASIC-2.12□□□□□ -2.75
APOBP04114 SNORA79-201ENST00000408376 140 ntBASIC-2.12□□□□□ -2.75
APOBP04114 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.12□□□□□ -2.75
APOBP04114 MTCO2P24-201ENST00000515611 426 ntBASIC-2.12□□□□□ -2.75
APOBP04114 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.12□□□□□ -2.75
APOBP04114 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-2.12□□□□□ -2.75
APOBP04114 MTND3P22-201ENST00000510932 243 ntBASIC-2.12□□□□□ -2.75
APOBP04114 RNU6-308P-201ENST00000390957 107 ntBASIC-2.12□□□□□ -2.75
APOBP04114 SNORD115-45-201ENST00000391078 81 ntBASIC-2.12□□□□□ -2.75
APOBP04114 RNU6-916P-201ENST00000516088 109 ntBASIC-2.12□□□□□ -2.75
APOBP04114 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-2.13□□□□□ -2.75
APOBP04114 SCARNA15-202ENST00000516881 127 ntBASIC-2.13□□□□□ -2.75
APOBP04114 RNU6-822P-201ENST00000362707 106 ntBASIC-2.13□□□□□ -2.75
APOBP04114 RNU6-996P-201ENST00000365438 107 ntBASIC-2.13□□□□□ -2.75
APOBP04114 SNORD63-201ENST00000384262 68 ntBASIC-2.13□□□□□ -2.75
APOBP04114 MIR548U-201ENST00000390728 81 ntBASIC-2.13□□□□□ -2.75
APOBP04114 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.13□□□□□ -2.75
APOBP04114 RNU6-681P-201ENST00000364012 104 ntBASIC-2.13□□□□□ -2.75
APOBP04114 AC116353.3-201ENST00000511215 249 ntBASIC-2.13□□□□□ -2.75
APOBP04114 AC009161.2-201ENST00000624626 138 ntBASIC-2.13□□□□□ -2.75
APOBP04114 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-2.13□□□□□ -2.75
APOBP04114 RNU6-445P-201ENST00000516949 107 ntBASIC-2.13□□□□□ -2.75
APOBP04114 MIR3145-201ENST00000580727 82 ntBASIC-2.13□□□□□ -2.75
APOBP04114 MIR3657-201ENST00000584818 117 ntBASIC-2.14□□□□□ -2.75
APOBP04114 RNU7-63P-201ENST00000459054 62 ntBASIC-2.14□□□□□ -2.75
APOBP04114 RNU5F-1-201ENST00000362507 117 ntBASIC-2.15□□□□□ -2.75
APOBP04114 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU6-65P-201ENST00000516332 98 ntBASIC-2.15□□□□□ -2.75
APOBP04114 MIR3682-201ENST00000581338 84 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU6-254P-201ENST00000363377 107 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU7-160P-201ENST00000516660 62 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU6-551P-201ENST00000516661 103 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU7-110P-201ENST00000516891 62 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU6-1220P-201ENST00000517126 108 ntBASIC-2.15□□□□□ -2.75
APOBP04114 AP002963.1-201ENST00000530590 184 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU6-238P-201ENST00000363313 106 ntBASIC-2.15□□□□□ -2.75
APOBP04114 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.15□□□□□ -2.75
APOBP04114 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU6-867P-201ENST00000364956 107 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU6-408P-201ENST00000515910 100 ntBASIC-2.15□□□□□ -2.75
APOBP04114 RNU6-95P-201ENST00000384697 107 ntBASIC-2.16□□□□□ -2.75
APOBP04114 MIR34C-201ENST00000384831 77 ntBASIC-2.16□□□□□ -2.75
APOBP04114 MTND4P28-201ENST00000426217 387 ntBASIC-2.16□□□□□ -2.75
APOBP04114 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.16□□□□□ -2.75
APOBP04114 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.16□□□□□ -2.76
APOBP04114 AC019235.1-201ENST00000503847 207 ntBASIC-2.16□□□□□ -2.76
APOBP04114 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.16□□□□□ -2.76
APOBP04114 U6.92-201ENST00000636464 89 ntBASIC-2.16□□□□□ -2.76
APOBP04114 RNU6-382P-201ENST00000365181 106 ntBASIC-2.16□□□□□ -2.76
APOBP04114 MIR526A2-201ENST00000390198 65 ntBASIC-2.16□□□□□ -2.76
APOBP04114 RNU6-530P-201ENST00000391180 107 ntBASIC-2.16□□□□□ -2.76
APOBP04114 MTND3P1-201ENST00000441336 220 ntBASIC-2.16□□□□□ -2.76
APOBP04114 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.16□□□□□ -2.76
APOBP04114 RNU6-845P-201ENST00000362578 103 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 263 ms