Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 U8.20-201ENST00000459445 131 ntBASIC-2.85□□□□□ -2.87
CHKB-CPT1BH3BT56 AC103591.3-201ENST00000608684 209 ntBASIC-2.85□□□□□ -2.87
CHKB-CPT1BH3BT56 MIR620-201ENST00000385232 95 ntBASIC-2.86□□□□□ -2.87
CHKB-CPT1BH3BT56 RNU6-695P-201ENST00000391157 104 ntBASIC-2.86□□□□□ -2.87
CHKB-CPT1BH3BT56 MTND4LP30-201ENST00000454092 297 ntBASIC-2.86□□□□□ -2.87
CHKB-CPT1BH3BT56 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.86□□□□□ -2.87
CHKB-CPT1BH3BT56 AL050303.3-201ENST00000613704 284 ntBASIC-2.86□□□□□ -2.87
CHKB-CPT1BH3BT56 AL627230.5-201ENST00000619807 58 ntBASIC-2.86□□□□□ -2.87
CHKB-CPT1BH3BT56 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.87□□□□□ -2.87
CHKB-CPT1BH3BT56 SNORD113-8-201ENST00000363497 74 ntBASIC-2.87□□□□□ -2.87
CHKB-CPT1BH3BT56 MIR1207-201ENST00000408249 87 ntBASIC-2.87□□□□□ -2.87
CHKB-CPT1BH3BT56 MIR548G-201ENST00000408442 89 ntBASIC-2.87□□□□□ -2.87
CHKB-CPT1BH3BT56 AC099799.1-201ENST00000439809 192 ntBASIC-2.87□□□□□ -2.87
CHKB-CPT1BH3BT56 MTND3P22-201ENST00000510932 243 ntBASIC-2.87□□□□□ -2.87
CHKB-CPT1BH3BT56 RNU6-90P-201ENST00000606352 106 ntBASIC-2.87□□□□□ -2.87
CHKB-CPT1BH3BT56 SNORA63.2-201ENST00000362603 126 ntBASIC-2.88□□□□□ -2.87
CHKB-CPT1BH3BT56 RNU6-194P-201ENST00000363862 105 ntBASIC-2.88□□□□□ -2.87
CHKB-CPT1BH3BT56 RNU6-841P-201ENST00000383872 107 ntBASIC-2.88□□□□□ -2.87
CHKB-CPT1BH3BT56 snoU13.17-201ENST00000458802 104 ntBASIC-2.88□□□□□ -2.87
CHKB-CPT1BH3BT56 MIR548AM-201ENST00000584298 74 ntBASIC-2.88□□□□□ -2.87
CHKB-CPT1BH3BT56 MIR4272-201ENST00000635924 64 ntBASIC-2.88□□□□□ -2.87
CHKB-CPT1BH3BT56 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.89□□□□□ -2.87
CHKB-CPT1BH3BT56 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.89□□□□□ -2.87
CHKB-CPT1BH3BT56 MTND5P26-201ENST00000426018 1752 ntBASIC-2.89□□□□□ -2.87
CHKB-CPT1BH3BT56 RNU4-90P-201ENST00000362773 141 ntBASIC-2.9□□□□□ -2.87
CHKB-CPT1BH3BT56 RNU4-24P-201ENST00000364565 139 ntBASIC-2.9□□□□□ -2.87
CHKB-CPT1BH3BT56 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.9□□□□□ -2.87
CHKB-CPT1BH3BT56 RNU6-211P-201ENST00000384047 107 ntBASIC-2.9□□□□□ -2.87
CHKB-CPT1BH3BT56 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.9□□□□□ -2.87
CHKB-CPT1BH3BT56 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.91□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.91□□□□□ -2.88
CHKB-CPT1BH3BT56 SNORA24B-201ENST00000384176 131 ntBASIC-2.91□□□□□ -2.88
CHKB-CPT1BH3BT56 MT-TM-201ENST00000387377 68 ntBASIC-2.91□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.91□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.91□□□□□ -2.88
CHKB-CPT1BH3BT56 ELOCP20-201ENST00000422460 345 ntBASIC-2.91□□□□□ -2.88
CHKB-CPT1BH3BT56 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.91□□□□□ -2.88
CHKB-CPT1BH3BT56 RPS29P30-201ENST00000600975 111 ntBASIC-2.91□□□□□ -2.88
CHKB-CPT1BH3BT56 MIR519A2-201ENST00000384990 87 ntBASIC-2.92□□□□□ -2.88
CHKB-CPT1BH3BT56 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.92□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.92□□□□□ -2.88
CHKB-CPT1BH3BT56 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.93□□□□□ -2.88
CHKB-CPT1BH3BT56 SNORD38.1-201ENST00000363863 68 ntBASIC-2.93□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-260P-201ENST00000384092 107 ntBASIC-2.93□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-890P-201ENST00000384121 107 ntBASIC-2.93□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-130P-201ENST00000411112 103 ntBASIC-2.93□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU4-88P-201ENST00000411220 86 ntBASIC-2.93□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-956P-201ENST00000458868 103 ntBASIC-2.93□□□□□ -2.88
CHKB-CPT1BH3BT56 U7.5-201ENST00000517224 61 ntBASIC-2.93□□□□□ -2.88
CHKB-CPT1BH3BT56 MIR3123-201ENST00000583417 75 ntBASIC-2.93□□□□□ -2.88
CHKB-CPT1BH3BT56 SNORA25.1-201ENST00000362326 128 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.541-201ENST00000384640 113 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-310P-201ENST00000384655 107 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU7-88P-201ENST00000458752 63 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.695-201ENST00000516715 107 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 MIR3140-201ENST00000583685 90 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 AC015540.1-201ENST00000615828 501 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 AL603755.1-201ENST00000619504 163 ntBASIC-2.94□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.95□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.394-201ENST00000383942 103 ntBASIC-2.95□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.95□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.96□□□□□ -2.88
CHKB-CPT1BH3BT56 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.96□□□□□ -2.88
CHKB-CPT1BH3BT56 RNA5SP147-201ENST00000516493 109 ntBASIC-2.96□□□□□ -2.88
CHKB-CPT1BH3BT56 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.96□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.96□□□□□ -2.88
CHKB-CPT1BH3BT56 AL132765.2-201ENST00000610812 351 ntBASIC-2.96□□□□□ -2.88
CHKB-CPT1BH3BT56 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.96□□□□□ -2.88
CHKB-CPT1BH3BT56 DLEU2_1.2-201ENST00000614667 120 ntBASIC-2.96□□□□□ -2.88
CHKB-CPT1BH3BT56 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.97□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-381P-201ENST00000391259 108 ntBASIC-2.97□□□□□ -2.88
CHKB-CPT1BH3BT56 SNORD54-201ENST00000459159 67 ntBASIC-2.97□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-65P-201ENST00000516332 98 ntBASIC-2.97□□□□□ -2.88
CHKB-CPT1BH3BT56 AC092794.1-201ENST00000612734 582 ntBASIC-2.97□□□□□ -2.88
CHKB-CPT1BH3BT56 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.98□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-326P-201ENST00000365480 107 ntBASIC-2.98□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-246P-201ENST00000384702 107 ntBASIC-2.98□□□□□ -2.89
CHKB-CPT1BH3BT56 SNORA19.1-201ENST00000410656 129 ntBASIC-2.98□□□□□ -2.89
CHKB-CPT1BH3BT56 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-2.98□□□□□ -2.89
CHKB-CPT1BH3BT56 MIR559-201ENST00000385188 96 ntBASIC-2.99□□□□□ -2.89
CHKB-CPT1BH3BT56 MIR548Q-201ENST00000408404 100 ntBASIC-2.99□□□□□ -2.89
CHKB-CPT1BH3BT56 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.99□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-518P-201ENST00000516056 96 ntBASIC-2.99□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-1046P-201ENST00000516538 107 ntBASIC-2.99□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.99□□□□□ -2.89
CHKB-CPT1BH3BT56 MIR4536-1-201ENST00000583537 88 ntBASIC-2.99□□□□□ -2.89
CHKB-CPT1BH3BT56 MIR376A1-201ENST00000616574 68 ntBASIC-2.99□□□□□ -2.89
CHKB-CPT1BH3BT56 Y_RNA.248-201ENST00000364501 109 ntBASIC-3□□□□□ -2.89
CHKB-CPT1BH3BT56 Y_RNA.315-201ENST00000365117 102 ntBASIC-3□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-290P-201ENST00000365212 101 ntBASIC-3□□□□□ -2.89
CHKB-CPT1BH3BT56 AC119751.7-201ENST00000600494 245 ntBASIC-3□□□□□ -2.89
CHKB-CPT1BH3BT56 AL365265.1-201ENST00000621045 234 ntBASIC-3□□□□□ -2.89
CHKB-CPT1BH3BT56 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3□□□□□ -2.89
CHKB-CPT1BH3BT56 Y_RNA.182-201ENST00000363880 111 ntBASIC-3.01□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-259P-201ENST00000383999 107 ntBASIC-3.01□□□□□ -2.89
CHKB-CPT1BH3BT56 RNY4P20-201ENST00000516678 93 ntBASIC-3.01□□□□□ -2.89
CHKB-CPT1BH3BT56 AC006254.2-201ENST00000603259 279 ntBASIC-3.01□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 291.9 ms