Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 RNY4P6-201ENST00000363667 96 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 SNORD50.2-201ENST00000365465 70 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 SNORD38.2-201ENST00000384470 69 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 MIR329-2-201ENST00000385029 84 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 MIR548I1-201ENST00000408810 149 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 MTND4LP9-201ENST00000427694 174 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 AC069271.1-201ENST00000445577 156 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 AC141557.1-201ENST00000540982 400 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 AL670379.3-201ENST00000605040 251 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 RNU6-90P-201ENST00000606352 106 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 MIR6828-201ENST00000636181 60 ntBASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
RAI1Q7Z5J4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.14□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.215-201ENST00000364204 112 ntBASIC0.14□□□□□ -2.39
RAI1Q7Z5J4 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
RAI1Q7Z5J4 RPL39P34-201ENST00000477141 156 ntBASIC0.14□□□□□ -2.39
RAI1Q7Z5J4 RNU6-915P-201ENST00000364943 103 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.448-201ENST00000384185 108 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 AC097635.1-201ENST00000450678 155 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 RNU7-200P-201ENST00000516105 62 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 RNA5SP395-201ENST00000516567 118 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 AC025166.1-201ENST00000612411 163 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 uc_338.10-201ENST00000621872 182 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 RNU6-664P-201ENST00000362381 107 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 MIR548M-201ENST00000408260 86 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 RNU6-1265P-201ENST00000516342 103 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 MIR3163-201ENST00000581592 73 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 TUG1_4.1-201ENST00000619464 181 ntBASIC0.13□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.114-201ENST00000363265 113 ntBASIC0.12□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.127-201ENST00000363386 109 ntBASIC0.12□□□□□ -2.39
RAI1Q7Z5J4 RNU6-209P-201ENST00000384118 107 ntBASIC0.12□□□□□ -2.39
RAI1Q7Z5J4 SNORA40-201ENST00000388090 126 ntBASIC0.12□□□□□ -2.39
RAI1Q7Z5J4 RNU6-907P-201ENST00000390924 102 ntBASIC0.12□□□□□ -2.39
RAI1Q7Z5J4 RNU6-521P-201ENST00000516663 105 ntBASIC0.12□□□□□ -2.39
RAI1Q7Z5J4 RNU6-782P-201ENST00000516852 104 ntBASIC0.12□□□□□ -2.39
RAI1Q7Z5J4 MIR4743-201ENST00000584576 69 ntBASIC0.12□□□□□ -2.39
RAI1Q7Z5J4 AP001362.1-201ENST00000625165 124 ntBASIC0.12□□□□□ -2.39
RAI1Q7Z5J4 RNU6-832P-201ENST00000363319 107 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.218-201ENST00000364218 104 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 MIR539-201ENST00000365690 78 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 RNU6-959P-201ENST00000384671 107 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 MIR610-201ENST00000385139 96 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 SNORD41.1-201ENST00000391000 69 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 RNA5SP268-201ENST00000516828 124 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 MIR548AD-201ENST00000584780 82 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.155-201ENST00000363632 101 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 RNU6-865P-201ENST00000364772 107 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 AP001328.1-201ENST00000528550 176 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 uc_338.28-201ENST00000612082 187 ntBASIC0.11□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.1□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.180-201ENST00000363867 113 ntBASIC0.1□□□□□ -2.39
RAI1Q7Z5J4 RNU6-886P-201ENST00000384319 105 ntBASIC0.1□□□□□ -2.39
RAI1Q7Z5J4 MIR5589-201ENST00000579442 60 ntBASIC0.1□□□□□ -2.39
RAI1Q7Z5J4 MIR5190-201ENST00000581537 80 ntBASIC0.1□□□□□ -2.39
RAI1Q7Z5J4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.1□□□□□ -2.39
RAI1Q7Z5J4 Y_RNA.71-201ENST00000362892 104 ntBASIC0.09□□□□□ -2.39
RAI1Q7Z5J4 RNU6-409P-201ENST00000384114 104 ntBASIC0.09□□□□□ -2.39
RAI1Q7Z5J4 RNU6-243P-201ENST00000391140 107 ntBASIC0.09□□□□□ -2.39
RAI1Q7Z5J4 RNU6-1254P-201ENST00000391266 104 ntBASIC0.09□□□□□ -2.39
RAI1Q7Z5J4 MIR1263-201ENST00000408324 86 ntBASIC0.09□□□□□ -2.39
RAI1Q7Z5J4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.09□□□□□ -2.39
RAI1Q7Z5J4 SNORA42.1-201ENST00000363515 137 ntBASIC0.09□□□□□ -2.4
RAI1Q7Z5J4 RNU6-571P-201ENST00000384128 107 ntBASIC0.09□□□□□ -2.4
RAI1Q7Z5J4 SNORD63B-201ENST00000411005 70 ntBASIC0.09□□□□□ -2.4
RAI1Q7Z5J4 RNU5E-3P-201ENST00000515913 68 ntBASIC0.09□□□□□ -2.4
RAI1Q7Z5J4 RNU6-772P-201ENST00000516042 105 ntBASIC0.09□□□□□ -2.4
RAI1Q7Z5J4 RNA5SP285-201ENST00000516619 119 ntBASIC0.09□□□□□ -2.4
RAI1Q7Z5J4 RNU1-29P-201ENST00000606574 126 ntBASIC0.09□□□□□ -2.4
RAI1Q7Z5J4 MIR8066-201ENST00000617280 78 ntBASIC0.09□□□□□ -2.4
RAI1Q7Z5J4 SNORA32-201ENST00000384072 121 ntBASIC0.08□□□□□ -2.4
RAI1Q7Z5J4 RNU6-804P-201ENST00000384286 107 ntBASIC0.08□□□□□ -2.4
RAI1Q7Z5J4 Y_RNA.525-201ENST00000384570 113 ntBASIC0.08□□□□□ -2.4
RAI1Q7Z5J4 HAR1A.1-201ENST00000459583 118 ntBASIC0.08□□□□□ -2.4
RAI1Q7Z5J4 Y_RNA.660-201ENST00000516002 120 ntBASIC0.08□□□□□ -2.4
RAI1Q7Z5J4 AC096720.1-201ENST00000604441 183 ntBASIC0.08□□□□□ -2.4
RAI1Q7Z5J4 MIRLET7D-201ENST00000362263 87 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 Y_RNA.309-201ENST00000365046 111 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 Y_RNA.568-201ENST00000384742 113 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 MIR516B1-201ENST00000385211 90 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 MIR548H2-201ENST00000408874 88 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 RNU6-257P-201ENST00000410238 98 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 HMGN2P22-201ENST00000427588 175 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 RNU7-159P-201ENST00000459284 62 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 MIR6086-201ENST00000638065 55 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 MTND5P18-201ENST00000445624 1801 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 RNU6-235P-201ENST00000362644 107 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 RNU6-704P-201ENST00000364162 103 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 RNU6-35P-201ENST00000384530 107 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 Y_RNA.555-201ENST00000384673 110 ntBASIC0.07□□□□□ -2.4
RAI1Q7Z5J4 SNORD110-201ENST00000408189 75 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 248.3 ms