Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 ZNF519P2-201ENST00000557032 169 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 RNU5E-4P-201ENST00000364931 120 ntBASIC-3.46□□□□□ -2.96
HMGA1P17096 RNY4P10-201ENST00000365571 96 ntBASIC-3.46□□□□□ -2.96
HMGA1P17096 Y_RNA.389-201ENST00000383924 113 ntBASIC-3.46□□□□□ -2.96
HMGA1P17096 Y_RNA.570-201ENST00000384750 101 ntBASIC-3.46□□□□□ -2.96
HMGA1P17096 SNORA40.3-201ENST00000390964 122 ntBASIC-3.46□□□□□ -2.96
HMGA1P17096 RNU6-1158P-201ENST00000391167 107 ntBASIC-3.46□□□□□ -2.96
HMGA1P17096 RNU7-154P-201ENST00000516194 62 ntBASIC-3.46□□□□□ -2.96
HMGA1P17096 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.47□□□□□ -2.96
HMGA1P17096 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-3.47□□□□□ -2.96
HMGA1P17096 AC082651.2-201ENST00000496833 166 ntBASIC-3.47□□□□□ -2.96
HMGA1P17096 SEPT14P8-201ENST00000508026 178 ntBASIC-3.47□□□□□ -2.96
HMGA1P17096 MIR3942-201ENST00000585264 109 ntBASIC-3.47□□□□□ -2.96
HMGA1P17096 AP000720.1-201ENST00000625091 483 ntBASIC-3.47□□□□□ -2.96
HMGA1P17096 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.48□□□□□ -2.97
HMGA1P17096 RNU6-630P-201ENST00000391258 106 ntBASIC-3.48□□□□□ -2.97
HMGA1P17096 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-3.48□□□□□ -2.97
HMGA1P17096 RNU6-235P-201ENST00000362644 107 ntBASIC-3.49□□□□□ -2.97
HMGA1P17096 RNU6-763P-201ENST00000390865 106 ntBASIC-3.49□□□□□ -2.97
HMGA1P17096 RNU6-191P-201ENST00000516295 94 ntBASIC-3.49□□□□□ -2.97
HMGA1P17096 RNU6-1149P-201ENST00000516810 97 ntBASIC-3.49□□□□□ -2.97
HMGA1P17096 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.49□□□□□ -2.97
HMGA1P17096 Y_RNA.77-201ENST00000362962 107 ntBASIC-3.5□□□□□ -2.97
HMGA1P17096 Y_RNA.622-201ENST00000411091 108 ntBASIC-3.5□□□□□ -2.97
HMGA1P17096 AL353193.1-201ENST00000421444 268 ntBASIC-3.5□□□□□ -2.97
HMGA1P17096 MIR4659A-201ENST00000580269 81 ntBASIC-3.5□□□□□ -2.97
HMGA1P17096 DLEU2_3.1-201ENST00000620005 73 ntBASIC-3.5□□□□□ -2.97
HMGA1P17096 AC073869.6-201ENST00000640656 341 ntBASIC-3.5□□□□□ -2.97
HMGA1P17096 SNORD78.2-201ENST00000391076 69 ntBASIC-3.51□□□□□ -2.97
HMGA1P17096 RNU4-69P-201ENST00000410677 143 ntBASIC-3.51□□□□□ -2.97
HMGA1P17096 MTND4P28-201ENST00000426217 387 ntBASIC-3.51□□□□□ -2.97
HMGA1P17096 RNU2-35P-201ENST00000516446 142 ntBASIC-3.51□□□□□ -2.97
HMGA1P17096 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.51□□□□□ -2.97
HMGA1P17096 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.52□□□□□ -2.97
HMGA1P17096 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.52□□□□□ -2.97
HMGA1P17096 SNORD77B-201ENST00000391112 67 ntBASIC-3.52□□□□□ -2.97
HMGA1P17096 SNORA19.1-201ENST00000410656 129 ntBASIC-3.52□□□□□ -2.97
HMGA1P17096 MTND2P22-201ENST00000444325 1033 ntBASIC-3.52□□□□□ -2.97
HMGA1P17096 SCARNA15-202ENST00000516881 127 ntBASIC-3.52□□□□□ -2.97
HMGA1P17096 MIR4999-201ENST00000585029 91 ntBASIC-3.52□□□□□ -2.97
HMGA1P17096 AL022161.1-201ENST00000604390 213 ntBASIC-3.52□□□□□ -2.97
HMGA1P17096 AC097520.1-201ENST00000624435 385 ntBASIC-3.52□□□□□ -2.97
HMGA1P17096 RNU6-495P-201ENST00000362995 107 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 SNORA15B-2-201ENST00000384058 135 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 SNORA15B-1-201ENST00000384334 135 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 RNU6-636P-201ENST00000384598 107 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 MIR519A2-201ENST00000384990 87 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 RNU6-1248P-201ENST00000391096 64 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 MRPS35P2-201ENST00000508242 191 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 RNA5SP153-201ENST00000516498 76 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 AC013734.1-201ENST00000619329 111 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 AC092794.2-201ENST00000620933 563 ntBASIC-3.53□□□□□ -2.97
HMGA1P17096 Y_RNA.394-201ENST00000383942 103 ntBASIC-3.54□□□□□ -2.98
HMGA1P17096 RNU6-616P-201ENST00000384353 107 ntBASIC-3.54□□□□□ -2.98
HMGA1P17096 SNORD38.2-201ENST00000384470 69 ntBASIC-3.54□□□□□ -2.98
HMGA1P17096 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-3.54□□□□□ -2.98
HMGA1P17096 RBMX2P4-201ENST00000441256 376 ntBASIC-3.54□□□□□ -2.98
HMGA1P17096 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-3.54□□□□□ -2.98
HMGA1P17096 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-3.54□□□□□ -2.98
HMGA1P17096 SNORD113-3-201ENST00000364830 72 ntBASIC-3.55□□□□□ -2.98
HMGA1P17096 Y_RNA.473-201ENST00000384333 102 ntBASIC-3.55□□□□□ -2.98
HMGA1P17096 RNU2-55P-201ENST00000411146 174 ntBASIC-3.55□□□□□ -2.98
HMGA1P17096 MTND2P39-201ENST00000457230 764 ntBASIC-3.55□□□□□ -2.98
HMGA1P17096 MIR2053-201ENST00000459295 91 ntBASIC-3.55□□□□□ -2.98
HMGA1P17096 AL138825.1-201ENST00000618587 192 ntBASIC-3.55□□□□□ -2.98
HMGA1P17096 RNU6-518P-201ENST00000516056 96 ntBASIC-3.56□□□□□ -2.98
HMGA1P17096 RNU6-751P-201ENST00000516382 101 ntBASIC-3.56□□□□□ -2.98
HMGA1P17096 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.57□□□□□ -2.98
HMGA1P17096 RNU6-500P-201ENST00000362349 107 ntBASIC-3.57□□□□□ -2.98
HMGA1P17096 Y_RNA.373-201ENST00000365600 103 ntBASIC-3.57□□□□□ -2.98
HMGA1P17096 RNU6-1156P-201ENST00000410365 100 ntBASIC-3.57□□□□□ -2.98
HMGA1P17096 AC138393.2-201ENST00000414742 246 ntBASIC-3.57□□□□□ -2.98
HMGA1P17096 RNU6-256P-201ENST00000516747 97 ntBASIC-3.57□□□□□ -2.98
HMGA1P17096 RNU7-110P-201ENST00000516891 62 ntBASIC-3.57□□□□□ -2.98
HMGA1P17096 MIR4790-201ENST00000577799 79 ntBASIC-3.57□□□□□ -2.98
HMGA1P17096 AC013791.1-201ENST00000616619 62 ntBASIC-3.57□□□□□ -2.98
HMGA1P17096 RNU6-478P-201ENST00000363904 110 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 Y_RNA.299-201ENST00000364973 94 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 RNU6-297P-201ENST00000384636 107 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 snoU13.17-201ENST00000458802 104 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 Y_RNA.691-201ENST00000516611 103 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 RNU6-971P-201ENST00000516920 106 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 MIR548AG1-201ENST00000579932 66 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 MIR3672-201ENST00000584290 82 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 U6.97-201ENST00000636904 101 ntBASIC-3.58□□□□□ -2.98
HMGA1P17096 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.59□□□□□ -2.98
HMGA1P17096 MIR203A-201ENST00000384836 110 ntBASIC-3.59□□□□□ -2.98
HMGA1P17096 MIR548A1-201ENST00000385041 97 ntBASIC-3.59□□□□□ -2.98
HMGA1P17096 RNU6-1234P-201ENST00000516877 103 ntBASIC-3.59□□□□□ -2.98
HMGA1P17096 Y_RNA.31-201ENST00000362574 102 ntBASIC-3.6□□□□□ -2.99
HMGA1P17096 RNU6-828P-201ENST00000364876 107 ntBASIC-3.6□□□□□ -2.99
HMGA1P17096 RNU6-1177P-201ENST00000391058 104 ntBASIC-3.6□□□□□ -2.99
HMGA1P17096 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.6□□□□□ -2.99
HMGA1P17096 MIR514A2-201ENST00000385131 88 ntBASIC-3.61□□□□□ -2.99
HMGA1P17096 MIR514A3-201ENST00000385132 88 ntBASIC-3.61□□□□□ -2.99
HMGA1P17096 RNU6-273P-201ENST00000516937 96 ntBASIC-3.61□□□□□ -2.99
HMGA1P17096 AL731768.1-201ENST00000603124 139 ntBASIC-3.61□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms