Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNU6-53P-201ENST00000365367 106 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 Y_RNA.536-201ENST00000384621 113 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 Y_RNA.588-201ENST00000391254 102 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 SNORD88.1-201ENST00000408684 91 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 RNA5SP501-201ENST00000410990 112 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 AC092427.1-202ENST00000430569 476 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 uc_338.6-201ENST00000613544 171 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 PVT1_3.1-201ENST00000620853 95 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 U6.100-201ENST00000636230 99 ntBASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 RNU6-1260P-201ENST00000362944 107 ntBASIC2.41□□□□□ -2.02
COL25A1Q9BXS0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.41□□□□□ -2.02
COL25A1Q9BXS0 RNU6-322P-201ENST00000516010 103 ntBASIC2.41□□□□□ -2.02
COL25A1Q9BXS0 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
COL25A1Q9BXS0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
COL25A1Q9BXS0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
COL25A1Q9BXS0 RNU6-396P-201ENST00000365369 105 ntBASIC2.4□□□□□ -2.03
COL25A1Q9BXS0 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
COL25A1Q9BXS0 RNU7-62P-201ENST00000458856 62 ntBASIC2.4□□□□□ -2.03
COL25A1Q9BXS0 Y_RNA.809-201ENST00000516058 95 ntBASIC2.4□□□□□ -2.03
COL25A1Q9BXS0 SNORD111.1-201ENST00000516421 86 ntBASIC2.4□□□□□ -2.03
COL25A1Q9BXS0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
COL25A1Q9BXS0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
COL25A1Q9BXS0 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
COL25A1Q9BXS0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.39□□□□□ -2.03
COL25A1Q9BXS0 AL691482.2-201ENST00000457453 84 ntBASIC2.39□□□□□ -2.03
COL25A1Q9BXS0 MIR3192-201ENST00000584920 77 ntBASIC2.39□□□□□ -2.03
COL25A1Q9BXS0 MIR6515-201ENST00000619843 57 ntBASIC2.39□□□□□ -2.03
COL25A1Q9BXS0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL25A1Q9BXS0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
COL25A1Q9BXS0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
COL25A1Q9BXS0 AC016717.2-201ENST00000609089 5141 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 RNU6-1079P-201ENST00000362861 110 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 RNU6-203P-201ENST00000384038 104 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 MT-TN-201ENST00000387400 73 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 RNU6-935P-201ENST00000410371 100 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 RNU6-1052P-201ENST00000411398 104 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 SNORD13-201ENST00000459299 104 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 RPL30P7-201ENST00000479312 323 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 RNU6-719P-201ENST00000516671 104 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 MIR548H5-201ENST00000580314 60 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 RNU7-10P-201ENST00000607194 63 ntBASIC2.37□□□□□ -2.03
COL25A1Q9BXS0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL25A1Q9BXS0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
COL25A1Q9BXS0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.36□□□□□ -2.03
COL25A1Q9BXS0 MIR194-1-201ENST00000384892 85 ntBASIC2.36□□□□□ -2.03
COL25A1Q9BXS0 RNU6-752P-201ENST00000516376 102 ntBASIC2.36□□□□□ -2.03
COL25A1Q9BXS0 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
COL25A1Q9BXS0 AC022709.1-201ENST00000615967 87 ntBASIC2.36□□□□□ -2.03
COL25A1Q9BXS0 MIR7978-201ENST00000636158 59 ntBASIC2.36□□□□□ -2.03
COL25A1Q9BXS0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL25A1Q9BXS0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 MIR101-2-201ENST00000362195 79 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 SNORA25.3-201ENST00000363205 127 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 RNA5SP190-201ENST00000365222 118 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 SNORD41-201ENST00000386967 70 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 RNU6-360P-201ENST00000390944 104 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 SNORD93-201ENST00000408813 74 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 RNA5SP100-201ENST00000410903 110 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 RNA5SP59-201ENST00000410922 110 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 Y_RNA.722-201ENST00000517279 114 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 AC013244.2-201ENST00000603396 103 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.35□□□□□ -2.03
COL25A1Q9BXS0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
COL25A1Q9BXS0 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
COL25A1Q9BXS0 RNU1-36P-201ENST00000365130 165 ntBASIC2.34□□□□□ -2.03
COL25A1Q9BXS0 MIR451A-201ENST00000385059 72 ntBASIC2.34□□□□□ -2.03
COL25A1Q9BXS0 AC004965.1-201ENST00000413033 213 ntBASIC2.34□□□□□ -2.03
COL25A1Q9BXS0 RNU6-982P-201ENST00000516216 102 ntBASIC2.34□□□□□ -2.03
COL25A1Q9BXS0 MIR2115-201ENST00000516657 100 ntBASIC2.34□□□□□ -2.03
COL25A1Q9BXS0 AC092634.7-201ENST00000621022 103 ntBASIC2.34□□□□□ -2.03
COL25A1Q9BXS0 Y_RNA.56-201ENST00000362798 112 ntBASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 RNU6-403P-201ENST00000363163 104 ntBASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 RNU6-654P-201ENST00000364373 107 ntBASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 RNU6-1177P-201ENST00000391058 104 ntBASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 RNU6-1054P-201ENST00000411293 104 ntBASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 RPS29P6-201ENST00000438196 145 ntBASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 MIR6733-201ENST00000635723 61 ntBASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 MIR4773-1-201ENST00000637203 78 ntBASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.33□□□□□ -2.04
COL25A1Q9BXS0 RNU6-446P-201ENST00000362827 106 ntBASIC2.32□□□□□ -2.04
COL25A1Q9BXS0 Y_RNA.258-201ENST00000364613 105 ntBASIC2.32□□□□□ -2.04
COL25A1Q9BXS0 RNU6-382P-201ENST00000365181 106 ntBASIC2.32□□□□□ -2.04
COL25A1Q9BXS0 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
COL25A1Q9BXS0 RNU6-274P-201ENST00000459566 107 ntBASIC2.32□□□□□ -2.04
COL25A1Q9BXS0 AP004217.1-201ENST00000480579 346 ntBASIC2.32□□□□□ -2.04
COL25A1Q9BXS0 MIR466-201ENST00000580653 84 ntBASIC2.32□□□□□ -2.04
COL25A1Q9BXS0 MIR5007-201ENST00000583098 95 ntBASIC2.32□□□□□ -2.04
COL25A1Q9BXS0 MIR377-201ENST00000362145 69 ntBASIC2.31□□□□□ -2.04
COL25A1Q9BXS0 Y_RNA.327-201ENST00000365201 102 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 332.3 ms