Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-321P-201ENST00000410912 106 ntBASIC1.75□□□□□ -2.13
CTDP1Q9Y5B0 AC245047.7-201ENST00000440265 293 ntBASIC1.75□□□□□ -2.13
CTDP1Q9Y5B0 Y_RNA.677-201ENST00000516401 85 ntBASIC1.75□□□□□ -2.13
CTDP1Q9Y5B0 MIR1255B1-201ENST00000636325 63 ntBASIC1.75□□□□□ -2.13
CTDP1Q9Y5B0 Y_RNA.155-201ENST00000363632 101 ntBASIC1.74□□□□□ -2.13
CTDP1Q9Y5B0 HSPE1P24-201ENST00000450782 238 ntBASIC1.74□□□□□ -2.13
CTDP1Q9Y5B0 RNA5SP170-201ENST00000517150 101 ntBASIC1.74□□□□□ -2.13
CTDP1Q9Y5B0 AC141557.1-201ENST00000540982 400 ntBASIC1.74□□□□□ -2.13
CTDP1Q9Y5B0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.74□□□□□ -2.13
CTDP1Q9Y5B0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.74□□□□□ -2.13
CTDP1Q9Y5B0 MIR8065-201ENST00000620577 100 ntBASIC1.74□□□□□ -2.13
CTDP1Q9Y5B0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 RNU6-1298P-201ENST00000362456 101 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 RNY1P10-201ENST00000363268 113 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 SNORA7.1-201ENST00000363750 139 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 SNORD26-201ENST00000384147 75 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 RNU6-616P-201ENST00000384353 107 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 SNORD38B-201ENST00000384690 67 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 RNU6-602P-201ENST00000411155 105 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 AL354695.1-201ENST00000427935 228 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 RNU6-947P-201ENST00000516264 106 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 AL157834.3-201ENST00000615543 103 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 SNORD38B-202ENST00000625943 69 ntBASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CTDP1Q9Y5B0 MIR302D-201ENST00000362275 68 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 RNU6-363P-201ENST00000362895 105 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 RNU4-67P-201ENST00000364569 141 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 RNU6-409P-201ENST00000384114 104 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 RNU6-342P-201ENST00000384521 104 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 AC090844.1-201ENST00000422019 156 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 MIR3192-201ENST00000584920 77 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 AL096861.1-201ENST00000610899 123 ntBASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.72□□□□□ -2.13
CTDP1Q9Y5B0 Y_RNA.78-201ENST00000362970 110 ntBASIC1.71□□□□□ -2.14
CTDP1Q9Y5B0 SNORA18-201ENST00000384416 132 ntBASIC1.71□□□□□ -2.14
CTDP1Q9Y5B0 Y_RNA.544-201ENST00000384650 113 ntBASIC1.71□□□□□ -2.14
CTDP1Q9Y5B0 SNORA19.1-201ENST00000410656 129 ntBASIC1.71□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-733P-201ENST00000410759 104 ntBASIC1.71□□□□□ -2.14
CTDP1Q9Y5B0 RNA5SP247-201ENST00000411181 105 ntBASIC1.71□□□□□ -2.14
CTDP1Q9Y5B0 RPL39P39-201ENST00000455840 151 ntBASIC1.71□□□□□ -2.14
CTDP1Q9Y5B0 MIR1270-201ENST00000459320 83 ntBASIC1.71□□□□□ -2.14
CTDP1Q9Y5B0 FAM71BP1-201ENST00000604431 523 ntBASIC1.71□□□□□ -2.14
CTDP1Q9Y5B0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CTDP1Q9Y5B0 RNU4-36P-201ENST00000364294 144 ntBASIC1.7□□□□□ -2.14
CTDP1Q9Y5B0 MIR590-201ENST00000385008 97 ntBASIC1.7□□□□□ -2.14
CTDP1Q9Y5B0 SNORA7.5-201ENST00000410672 110 ntBASIC1.7□□□□□ -2.14
CTDP1Q9Y5B0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.7□□□□□ -2.14
CTDP1Q9Y5B0 Y_RNA.694-201ENST00000516677 117 ntBASIC1.7□□□□□ -2.14
CTDP1Q9Y5B0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CTDP1Q9Y5B0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
CTDP1Q9Y5B0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.69□□□□□ -2.14
CTDP1Q9Y5B0 AC079140.2-201ENST00000506193 142 ntBASIC1.69□□□□□ -2.14
CTDP1Q9Y5B0 AC019176.1-201ENST00000518519 225 ntBASIC1.69□□□□□ -2.14
CTDP1Q9Y5B0 DEFB131E-201ENST00000532329 154 ntBASIC1.69□□□□□ -2.14
CTDP1Q9Y5B0 MIR4421-201ENST00000578133 69 ntBASIC1.69□□□□□ -2.14
CTDP1Q9Y5B0 AP001318.4-201ENST00000616637 121 ntBASIC1.69□□□□□ -2.14
CTDP1Q9Y5B0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CTDP1Q9Y5B0 Y_RNA.43-201ENST00000362670 111 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 SNORA25.3-201ENST00000363205 127 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 SNORD1A-201ENST00000364968 72 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 AC027119.1-201ENST00000440877 241 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-904P-201ENST00000516206 101 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-109P-201ENST00000516364 107 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-184P-201ENST00000516514 107 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 RNU7-35P-201ENST00000517174 62 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 Y_RNA.818-201ENST00000618813 71 ntBASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
CTDP1Q9Y5B0 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 Y_RNA.348-201ENST00000365403 103 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 Y_RNA.360-201ENST00000365512 102 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 MIR605-201ENST00000385078 83 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-955P-201ENST00000410497 104 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 SNORA40.13-201ENST00000516379 120 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-521P-201ENST00000516663 105 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 MIR4694-201ENST00000578534 80 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 MIR3937-201ENST00000580135 106 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.67□□□□□ -2.14
CTDP1Q9Y5B0 RNY3P2-201ENST00000362918 102 ntBASIC1.66□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-1255P-201ENST00000363434 112 ntBASIC1.66□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-1099P-201ENST00000363533 107 ntBASIC1.66□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-396P-201ENST00000365369 105 ntBASIC1.66□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.66□□□□□ -2.14
CTDP1Q9Y5B0 RNU6-679P-201ENST00000391003 106 ntBASIC1.66□□□□□ -2.14
CTDP1Q9Y5B0 RNY4P30-201ENST00000410216 95 ntBASIC1.66□□□□□ -2.14
CTDP1Q9Y5B0 RNA5SP237-201ENST00000410414 113 ntBASIC1.66□□□□□ -2.14
CTDP1Q9Y5B0 RNU7-79P-201ENST00000516082 62 ntBASIC1.66□□□□□ -2.14
CTDP1Q9Y5B0 Y_RNA.10-201ENST00000362371 110 ntBASIC1.65□□□□□ -2.15
CTDP1Q9Y5B0 RNU6-905P-201ENST00000384434 107 ntBASIC1.65□□□□□ -2.15
CTDP1Q9Y5B0 MIR577-201ENST00000385196 96 ntBASIC1.65□□□□□ -2.15
CTDP1Q9Y5B0 RPL30P7-201ENST00000479312 323 ntBASIC1.65□□□□□ -2.15
CTDP1Q9Y5B0 AL512310.12-203ENST00000640543 90 ntBASIC1.65□□□□□ -2.15
CTDP1Q9Y5B0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CTDP1Q9Y5B0 RNU6-832P-201ENST00000363319 107 ntBASIC1.64□□□□□ -2.15
CTDP1Q9Y5B0 RNU6-640P-201ENST00000363693 105 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms