Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
HAPLN3Q96S86 Y_RNA.163-201ENST00000363702 113 ntBASIC1.52□□□□□ -2.17
HAPLN3Q96S86 RPL39P39-201ENST00000455840 151 ntBASIC1.52□□□□□ -2.17
HAPLN3Q96S86 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
HAPLN3Q96S86 AL512310.8-201ENST00000550183 120 ntBASIC1.52□□□□□ -2.17
HAPLN3Q96S86 MIR5009-201ENST00000578736 100 ntBASIC1.52□□□□□ -2.17
HAPLN3Q96S86 MIR8070-201ENST00000616510 88 ntBASIC1.52□□□□□ -2.17
HAPLN3Q96S86 SNORD115-19-201ENST00000363098 82 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 SNORD115-18-201ENST00000363293 82 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 SNORD115-17-201ENST00000364612 82 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 Y_RNA.299-201ENST00000364973 94 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 RNU6-342P-201ENST00000384521 104 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 RNA5SP89-201ENST00000410300 108 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 RPS27P16-201ENST00000425758 201 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 AC244023.1-201ENST00000426884 112 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 AC242498.1-201ENST00000604134 111 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 AL162726.3-218ENST00000636401 95 ntBASIC1.51□□□□□ -2.17
HAPLN3Q96S86 RNU6-1298P-201ENST00000362456 101 ntBASIC1.5□□□□□ -2.17
HAPLN3Q96S86 Y_RNA.49-201ENST00000362714 112 ntBASIC1.5□□□□□ -2.17
HAPLN3Q96S86 SNORA25.3-201ENST00000363205 127 ntBASIC1.5□□□□□ -2.17
HAPLN3Q96S86 SNORA32-201ENST00000384072 121 ntBASIC1.5□□□□□ -2.17
HAPLN3Q96S86 RNU6-616P-201ENST00000384353 107 ntBASIC1.5□□□□□ -2.17
HAPLN3Q96S86 AL031737.1-201ENST00000450125 223 ntBASIC1.5□□□□□ -2.17
HAPLN3Q96S86 AP003716.2-201ENST00000528260 108 ntBASIC1.5□□□□□ -2.17
HAPLN3Q96S86 ZNF209P-201ENST00000593450 2304 ntBASIC1.5□□□□□ -2.17
HAPLN3Q96S86 RNA5SP48-201ENST00000363969 126 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 Y_RNA.327-201ENST00000365201 102 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 Y_RNA.328-201ENST00000365208 113 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HAPLN3Q96S86 RNU6-816P-201ENST00000390914 107 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 RNU6-1268P-201ENST00000391214 107 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 RNU6-1239P-201ENST00000391310 107 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 SNORA19.1-201ENST00000410656 129 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 AL353813.1-201ENST00000440700 253 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 RNU6-168P-201ENST00000516189 101 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 RNU6-947P-201ENST00000516264 106 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 MIR4285-201ENST00000581001 85 ntBASIC1.49□□□□□ -2.17
HAPLN3Q96S86 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HAPLN3Q96S86 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
HAPLN3Q96S86 Y_RNA.309-201ENST00000365046 111 ntBASIC1.48□□□□□ -2.17
HAPLN3Q96S86 AC245047.7-201ENST00000440265 293 ntBASIC1.48□□□□□ -2.17
HAPLN3Q96S86 RNU6-165P-201ENST00000517170 99 ntBASIC1.48□□□□□ -2.17
HAPLN3Q96S86 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
HAPLN3Q96S86 RNU6-363P-201ENST00000362895 105 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 RNU6-756P-201ENST00000383997 107 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 SNORA51.5-201ENST00000384126 131 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 SNORA18-201ENST00000384416 132 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 Y_RNA.495-201ENST00000384435 112 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 MIR1302-5-201ENST00000408164 150 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 AL133373.1-201ENST00000497098 94 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 RNU7-35P-201ENST00000517174 62 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 RNU6-537P-201ENST00000517277 103 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 CYP3A52P-201ENST00000563326 91 ntBASIC1.47□□□□□ -2.17
HAPLN3Q96S86 RNU6-766P-201ENST00000362478 107 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 RNU6-392P-201ENST00000364926 101 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 Y_RNA.354-201ENST00000365448 111 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 SNORD38B-201ENST00000384690 67 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 MIR605-201ENST00000385078 83 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 MIR518E-201ENST00000385252 88 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 RPL39P25-201ENST00000449384 154 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 AL157834.3-201ENST00000615543 103 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 SNORD38B-202ENST00000625943 69 ntBASIC1.46□□□□□ -2.18
HAPLN3Q96S86 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HAPLN3Q96S86 RNU4-67P-201ENST00000364569 141 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 Y_RNA.508-201ENST00000384502 114 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 MIR590-201ENST00000385008 97 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 RNU6-1307P-201ENST00000391012 103 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 MIR1185-1-201ENST00000408598 86 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 MIR1912-201ENST00000410389 80 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 RNU6-1054P-201ENST00000411293 104 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.45□□□□□ -2.18
HAPLN3Q96S86 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 RNU6-109P-201ENST00000516364 107 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 RNU6-184P-201ENST00000516514 107 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.45□□□□□ -2.18
HAPLN3Q96S86 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HAPLN3Q96S86 RNU6-32P-201ENST00000383948 107 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNU6-13P-201ENST00000384248 107 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNU6-12P-201ENST00000384604 107 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNU6-41P-201ENST00000384741 107 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNU6-1237P-201ENST00000384777 107 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNU6-679P-201ENST00000391003 106 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNU7-79P-201ENST00000516082 62 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNU6-904P-201ENST00000516206 101 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNU6-521P-201ENST00000516663 105 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RN7SKP88-201ENST00000516847 250 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 MIR4421-201ENST00000578133 69 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 7SK.8-201ENST00000612110 250 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 7SK.11-201ENST00000615477 250 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 7SK.13-201ENST00000622040 250 ntBASIC1.44□□□□□ -2.18
HAPLN3Q96S86 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HAPLN3Q96S86 RNU6-1099P-201ENST00000363533 107 ntBASIC1.43□□□□□ -2.18
HAPLN3Q96S86 Y_RNA.155-201ENST00000363632 101 ntBASIC1.43□□□□□ -2.18
HAPLN3Q96S86 Y_RNA.348-201ENST00000365403 103 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 340 ms