Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.32■□□□□ 0.52
SNAP47Q5SQN1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 AL359075.1-203ENST00000462729 1002 ntBASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNAP47Q5SQN1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.3■□□□□ 0.52
SNAP47Q5SQN1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.29■□□□□ 0.52
SNAP47Q5SQN1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAP47Q5SQN1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SNAP47Q5SQN1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SNAP47Q5SQN1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAP47Q5SQN1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
SNAP47Q5SQN1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNAP47Q5SQN1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms