Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.7■□□□□ 0.9
COL1A2P08123 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.7■□□□□ 0.9
COL1A2P08123 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COL1A2P08123 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A2P08123 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A2P08123 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A2P08123 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A2P08123 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A2P08123 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A2P08123 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A2P08123 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A2P08123 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COL1A2P08123 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A2P08123 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
COL1A2P08123 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A2P08123 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COL1A2P08123 HLA-F-220ENST00000434407 884 ntBASIC20.69■□□□□ 0.9
COL1A2P08123 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A2P08123 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.69■□□□□ 0.9
COL1A2P08123 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.69■□□□□ 0.9
COL1A2P08123 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.69■□□□□ 0.9
COL1A2P08123 AC010240.3-201ENST00000607688 395 ntBASIC20.69■□□□□ 0.9
COL1A2P08123 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.69■□□□□ 0.9
COL1A2P08123 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.69■□□□□ 0.9
COL1A2P08123 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A2P08123 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A2P08123 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COL1A2P08123 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A2P08123 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A2P08123 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COL1A2P08123 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A2P08123 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.68■□□□□ 0.9
COL1A2P08123 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A2P08123 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A2P08123 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.68■□□□□ 0.9
COL1A2P08123 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A2P08123 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.68■□□□□ 0.9
COL1A2P08123 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.68■□□□□ 0.9
COL1A2P08123 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.68■□□□□ 0.9
COL1A2P08123 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A2P08123 AC079602.3-201ENST00000623931 403 ntBASIC20.68■□□□□ 0.9
COL1A2P08123 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A2P08123 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.68■□□□□ 0.9
COL1A2P08123 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A2P08123 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL1A2P08123 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.67■□□□□ 0.9
COL1A2P08123 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.67■□□□□ 0.9
COL1A2P08123 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.67■□□□□ 0.9
COL1A2P08123 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 AFG3L1P-217ENST00000557444 2447 ntBASIC20.67■□□□□ 0.9
COL1A2P08123 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.67■□□□□ 0.9
COL1A2P08123 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
COL1A2P08123 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.67■□□□□ 0.9
COL1A2P08123 MIR3180-4-201ENST00000582223 153 ntBASIC20.67■□□□□ 0.9
COL1A2P08123 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.67■□□□□ 0.9
COL1A2P08123 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.67■□□□□ 0.9
COL1A2P08123 AL136038.4-201ENST00000603606 1261 ntBASIC20.67■□□□□ 0.9
COL1A2P08123 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
COL1A2P08123 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL1A2P08123 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.67■□□□□ 0.9
COL1A2P08123 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.66■□□□□ 0.9
COL1A2P08123 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL1A2P08123 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
COL1A2P08123 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.66■□□□□ 0.9
COL1A2P08123 AC093458.2-201ENST00000623150 629 ntBASIC20.66■□□□□ 0.9
COL1A2P08123 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.66■□□□□ 0.9
COL1A2P08123 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
COL1A2P08123 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
COL1A2P08123 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
COL1A2P08123 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL1A2P08123 HEIH-201ENST00000623091 1652 ntBASIC20.65■□□□□ 0.9
COL1A2P08123 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL1A2P08123 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL1A2P08123 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL1A2P08123 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.65■□□□□ 0.9
COL1A2P08123 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.65■□□□□ 0.9
COL1A2P08123 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms