Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 NIFKP9-201ENST00000419265 221 ntBASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRGV1A0A0A0MS02 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRGV1A0A0A0MS02 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRGV1A0A0A0MS02 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.71□□□□□ -0.22
TRGV1A0A0A0MS02 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRGV1A0A0A0MS02 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.71□□□□□ -0.22
TRGV1A0A0A0MS02 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.71□□□□□ -0.22
TRGV1A0A0A0MS02 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRGV1A0A0A0MS02 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRGV1A0A0A0MS02 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 AL445675.2-201ENST00000620291 557 ntBASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 AL359736.2-201ENST00000621992 437 ntBASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 NFIC-211ENST00000641145 8399 ntBASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 FEM1AP3-201ENST00000403722 1741 ntBASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV1A0A0A0MS02 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 AL158047.1-201ENST00000445918 881 ntBASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 KSR1P1-201ENST00000446298 240 ntBASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms