Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU7-45P-201ENST00000459460 63 ntBASIC1.68□□□□□ -2.14
SMC1BQ8NDV3 MIR8065-201ENST00000620577 100 ntBASIC1.68□□□□□ -2.14
SMC1BQ8NDV3 MIR6717-201ENST00000622747 73 ntBASIC1.68□□□□□ -2.14
SMC1BQ8NDV3 MIR6767-201ENST00000637302 66 ntBASIC1.68□□□□□ -2.14
SMC1BQ8NDV3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SMC1BQ8NDV3 RNU6-235P-201ENST00000362644 107 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 SNORA25.3-201ENST00000363205 127 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 RNU6-1117P-201ENST00000384525 104 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 MIR222-201ENST00000384992 110 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 AC245047.7-201ENST00000440265 293 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 HSPE1P19-201ENST00000603327 295 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 MIR8055-201ENST00000610739 97 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 Z97988.1-201ENST00000637697 135 ntBASIC1.67□□□□□ -2.14
SMC1BQ8NDV3 AL161722.3-201ENST00000605789 2983 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 MIR103A2-201ENST00000362154 78 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 RNU6-396P-201ENST00000365369 105 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 AL022718.1-201ENST00000412004 84 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 RN7SKP179-201ENST00000516126 217 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 RNU6-62P-201ENST00000516526 102 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 RNU11-2P-201ENST00000516898 142 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 MIR4305-201ENST00000583252 102 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 AC108081.1-201ENST00000604358 221 ntBASIC1.66□□□□□ -2.14
SMC1BQ8NDV3 SNORA22.1-201ENST00000362701 134 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 RNA5SP264-201ENST00000363115 107 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 SNORD38B-201ENST00000384690 67 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 SNORA26.6-201ENST00000391256 115 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 AC008267.6-201ENST00000441664 139 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 RN7SKP19-201ENST00000516016 252 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 SNORA31.4-201ENST00000516049 129 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 RNU6-1061P-201ENST00000516530 99 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 SNORD38B-202ENST00000625943 69 ntBASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.65□□□□□ -2.15
SMC1BQ8NDV3 Y_RNA.71-201ENST00000362892 104 ntBASIC1.64□□□□□ -2.15
SMC1BQ8NDV3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.64□□□□□ -2.15
SMC1BQ8NDV3 SNORA31.2-201ENST00000516019 134 ntBASIC1.64□□□□□ -2.15
SMC1BQ8NDV3 MIR2115-201ENST00000516657 100 ntBASIC1.64□□□□□ -2.15
SMC1BQ8NDV3 U2.22-201ENST00000636441 106 ntBASIC1.64□□□□□ -2.15
SMC1BQ8NDV3 SNORD113-1-201ENST00000365321 69 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 SNORD116-14-201ENST00000383894 92 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 SNORD116-17-201ENST00000383929 92 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 Y_RNA.433-201ENST00000384089 102 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 SNORD116-15-201ENST00000384445 92 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 SNORD116-19-201ENST00000384729 92 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 SNORA19-201ENST00000384737 128 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 RNA5SP144-201ENST00000410846 116 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 AL606753.1-201ENST00000427435 87 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 snoU13.25-201ENST00000458945 104 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 RNU7-164P-201ENST00000459221 62 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 Y_RNA.681-201ENST00000516445 113 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 RNU6-1234P-201ENST00000516877 103 ntBASIC1.63□□□□□ -2.15
SMC1BQ8NDV3 AL157777.2-201ENST00000258070 137 ntBASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 RNA5SP457-201ENST00000363657 124 ntBASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 Y_RNA.218-201ENST00000364218 104 ntBASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 RNA5SP136-201ENST00000410906 107 ntBASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 AC048334.1-201ENST00000477975 159 ntBASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 AP003716.2-201ENST00000528260 108 ntBASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 MIR3660-201ENST00000584845 100 ntBASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 AP000753.3-201ENST00000604083 169 ntBASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SMC1BQ8NDV3 Y_RNA.127-201ENST00000363386 109 ntBASIC1.61□□□□□ -2.15
SMC1BQ8NDV3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.61□□□□□ -2.15
SMC1BQ8NDV3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.61□□□□□ -2.15
SMC1BQ8NDV3 MIR6841-201ENST00000637129 72 ntBASIC1.61□□□□□ -2.15
SMC1BQ8NDV3 Y_RNA.298-201ENST00000364960 107 ntBASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 SNORA40.6-201ENST00000391153 128 ntBASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 MIR1263-201ENST00000408324 86 ntBASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 MIR1185-1-201ENST00000408598 86 ntBASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 RNU6-955P-201ENST00000410497 104 ntBASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 RNU6-602P-201ENST00000411155 105 ntBASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 RNU6-772P-201ENST00000516042 105 ntBASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 RNU6-1333P-201ENST00000516162 93 ntBASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 MIR5000-201ENST00000577717 103 ntBASIC1.6□□□□□ -2.15
SMC1BQ8NDV3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
SMC1BQ8NDV3 RNU6-22P-201ENST00000384355 107 ntBASIC1.59□□□□□ -2.15
SMC1BQ8NDV3 MIR1302-7-201ENST00000408841 72 ntBASIC1.59□□□□□ -2.15
SMC1BQ8NDV3 RNU7-107P-201ENST00000459121 61 ntBASIC1.59□□□□□ -2.15
SMC1BQ8NDV3 RNU7-113P-201ENST00000459273 62 ntBASIC1.59□□□□□ -2.15
SMC1BQ8NDV3 AC004223.1-201ENST00000479840 271 ntBASIC1.59□□□□□ -2.15
SMC1BQ8NDV3 RNY4P20-201ENST00000516678 93 ntBASIC1.59□□□□□ -2.15
SMC1BQ8NDV3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.59□□□□□ -2.15
SMC1BQ8NDV3 SNORD58C-201ENST00000365223 64 ntBASIC1.58□□□□□ -2.16
SMC1BQ8NDV3 MT-TN-201ENST00000387400 73 ntBASIC1.58□□□□□ -2.16
SMC1BQ8NDV3 MIR759-201ENST00000390224 91 ntBASIC1.58□□□□□ -2.16
SMC1BQ8NDV3 AC090844.1-201ENST00000422019 156 ntBASIC1.58□□□□□ -2.16
SMC1BQ8NDV3 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
SMC1BQ8NDV3 RNU7-123P-201ENST00000515911 60 ntBASIC1.58□□□□□ -2.16
SMC1BQ8NDV3 RNU6-659P-201ENST00000516454 104 ntBASIC1.58□□□□□ -2.16
SMC1BQ8NDV3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 668.7 ms