Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
HLA-DOBP13765 AC008163.1-202ENST00000636004 2889 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 SNORD115-2-201ENST00000362842 82 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 SNORD115-20-201ENST00000365099 82 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 RNU6-81P-201ENST00000365608 104 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 SNORA2B-201ENST00000384583 137 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 SNORD12C-201ENST00000386307 89 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 RNU6-205P-201ENST00000390858 107 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 Y_RNA.617-201ENST00000410920 90 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 AC002429.1-201ENST00000437672 148 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 RNU7-62P-201ENST00000458856 62 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 snoU13.2-201ENST00000459201 104 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 RNU7-113P-201ENST00000459273 62 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 RNU7-123P-201ENST00000515911 60 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 RN7SKP19-201ENST00000516016 252 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 RNU2-35P-201ENST00000516446 142 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 IGHVII-40-1-201ENST00000517316 58 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 AC036111.3-201ENST00000526389 112 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 MIR3910-1-201ENST00000580936 111 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 AC106800.4-201ENST00000614905 153 ntBASIC1□□□□□ -2.25
HLA-DOBP13765 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
HLA-DOBP13765 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HLA-DOBP13765 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HLA-DOBP13765 RNU6-80P-201ENST00000384195 107 ntBASIC0.99□□□□□ -2.25
HLA-DOBP13765 Y_RNA.531-201ENST00000384589 121 ntBASIC0.99□□□□□ -2.25
HLA-DOBP13765 MIR588-201ENST00000384900 83 ntBASIC0.99□□□□□ -2.25
HLA-DOBP13765 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
HLA-DOBP13765 RNA5SP95-201ENST00000410319 137 ntBASIC0.99□□□□□ -2.25
HLA-DOBP13765 RNA5SP136-201ENST00000410906 107 ntBASIC0.99□□□□□ -2.25
HLA-DOBP13765 RNY4P20-201ENST00000516678 93 ntBASIC0.99□□□□□ -2.25
HLA-DOBP13765 RNU6-1258P-201ENST00000516911 111 ntBASIC0.99□□□□□ -2.25
HLA-DOBP13765 AC004812.1-201ENST00000540773 146 ntBASIC0.99□□□□□ -2.25
HLA-DOBP13765 RNU6-235P-201ENST00000362644 107 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 Y_RNA.171-201ENST00000363760 102 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 MIR563-201ENST00000385080 79 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 IGKV1-22-201ENST00000524313 326 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 snoU13.31-201ENST00000607291 104 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 MIR6078-201ENST00000611069 100 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 MIR6740-201ENST00000618268 113 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 AC012676.2-201ENST00000619258 186 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 AC132825.6-201ENST00000638861 357 ntBASIC0.98□□□□□ -2.25
HLA-DOBP13765 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
HLA-DOBP13765 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 Y_RNA.299-201ENST00000364973 94 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 Y_RNA.327-201ENST00000365201 102 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNU6-53P-201ENST00000365367 106 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNU6-959P-201ENST00000384671 107 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 MIR618-201ENST00000385287 98 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNU6-1165P-201ENST00000410119 107 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNA5SP237-201ENST00000410414 113 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNU4-61P-201ENST00000411243 107 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 AL512326.2-201ENST00000426359 151 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNU6-237P-201ENST00000515985 71 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNU7-40P-201ENST00000516397 64 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNA5SP33-201ENST00000516687 98 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 RNU6-789P-201ENST00000517105 102 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 AC023827.1-201ENST00000569247 97 ntBASIC0.97□□□□□ -2.25
HLA-DOBP13765 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HLA-DOBP13765 SNORD58C-201ENST00000365223 64 ntBASIC0.96□□□□□ -2.26
HLA-DOBP13765 Y_RNA.470-201ENST00000384307 117 ntBASIC0.96□□□□□ -2.26
HLA-DOBP13765 SNORA18-201ENST00000384416 132 ntBASIC0.96□□□□□ -2.26
HLA-DOBP13765 MT-TF-201ENST00000387314 71 ntBASIC0.96□□□□□ -2.26
HLA-DOBP13765 AL603825.1-201ENST00000438481 80 ntBASIC0.96□□□□□ -2.26
HLA-DOBP13765 MIR18B-201ENST00000454574 71 ntBASIC0.96□□□□□ -2.26
HLA-DOBP13765 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
HLA-DOBP13765 AL662814.1-201ENST00000617364 121 ntBASIC0.96□□□□□ -2.26
HLA-DOBP13765 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HLA-DOBP13765 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.95□□□□□ -2.26
HLA-DOBP13765 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.95□□□□□ -2.26
HLA-DOBP13765 Y_RNA.218-201ENST00000364218 104 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 MIR200A-201ENST00000384875 90 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 MIRLET7F2-201ENST00000385277 83 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 RNU6-1086P-201ENST00000410930 100 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 RPS23P4-201ENST00000487908 423 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 COX6CP6-201ENST00000490840 228 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 RNU6-772P-201ENST00000516042 105 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 RNU6-1061P-201ENST00000516530 99 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
HLA-DOBP13765 MIR4781-201ENST00000585250 76 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
HLA-DOBP13765 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HLA-DOBP13765 Y_RNA.71-201ENST00000362892 104 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 Y_RNA.213-201ENST00000364178 111 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 SNORD116-14-201ENST00000383894 92 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 SNORD116-17-201ENST00000383929 92 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 SNORD116-15-201ENST00000384445 92 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 RNU6-342P-201ENST00000384521 104 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 SNORD116-19-201ENST00000384729 92 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 MIR1263-201ENST00000408324 86 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 RNU6-994P-201ENST00000410507 111 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 RNU6-781P-201ENST00000516377 101 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
HLA-DOBP13765 MIR30D-201ENST00000362283 70 ntBASIC0.93□□□□□ -2.26
HLA-DOBP13765 Y_RNA.198-201ENST00000364013 98 ntBASIC0.93□□□□□ -2.26
HLA-DOBP13765 Y_RNA.346-201ENST00000365385 112 ntBASIC0.93□□□□□ -2.26
HLA-DOBP13765 Y_RNA.528-201ENST00000384575 108 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms