Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-1081P-201ENST00000384537 107 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 SNORD116-19-201ENST00000384729 92 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 RNU6-1067P-201ENST00000384752 107 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 AL158147.1-201ENST00000443970 75 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 RNU6-998P-201ENST00000515894 101 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 RNU7-43P-201ENST00000516554 64 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 AP000648.3-201ENST00000623539 4507 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 Y_RNA.127-201ENST00000363386 109 ntBASIC1.91□□□□□ -2.1
RTF1Q92541 RNU1-133P-201ENST00000364867 167 ntBASIC1.91□□□□□ -2.1
RTF1Q92541 SNORA24-201ENST00000384096 131 ntBASIC1.91□□□□□ -2.1
RTF1Q92541 Y_RNA.494-201ENST00000384432 111 ntBASIC1.91□□□□□ -2.1
RTF1Q92541 AL451046.2-201ENST00000403074 277 ntBASIC1.91□□□□□ -2.1
RTF1Q92541 AL513534.2-201ENST00000603836 250 ntBASIC1.91□□□□□ -2.1
RTF1Q92541 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.91□□□□□ -2.1
RTF1Q92541 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.91□□□□□ -2.1
RTF1Q92541 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.9□□□□□ -2.11
RTF1Q92541 RNU6-508P-201ENST00000363231 103 ntBASIC1.9□□□□□ -2.11
RTF1Q92541 Y_RNA.294-201ENST00000364916 102 ntBASIC1.9□□□□□ -2.11
RTF1Q92541 Y_RNA.537-201ENST00000384626 109 ntBASIC1.9□□□□□ -2.11
RTF1Q92541 RNU6-1168P-201ENST00000390831 104 ntBASIC1.9□□□□□ -2.11
RTF1Q92541 RNU2-51P-201ENST00000410708 197 ntBASIC1.9□□□□□ -2.11
RTF1Q92541 snoU13.9-201ENST00000458927 103 ntBASIC1.9□□□□□ -2.11
RTF1Q92541 RN7SKP179-201ENST00000516126 217 ntBASIC1.9□□□□□ -2.11
RTF1Q92541 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
RTF1Q92541 AC091932.4-201ENST00000623386 200 ntBASIC1.9□□□□□ -2.11
RTF1Q92541 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RTF1Q92541 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RTF1Q92541 SNORD28B-201ENST00000390993 75 ntBASIC1.89□□□□□ -2.11
RTF1Q92541 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.89□□□□□ -2.11
RTF1Q92541 AL035398.1-201ENST00000430869 322 ntBASIC1.89□□□□□ -2.11
RTF1Q92541 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.89□□□□□ -2.11
RTF1Q92541 RNU6-313P-201ENST00000516317 112 ntBASIC1.89□□□□□ -2.11
RTF1Q92541 RNU6-1234P-201ENST00000516877 103 ntBASIC1.89□□□□□ -2.11
RTF1Q92541 MIR4421-201ENST00000578133 69 ntBASIC1.89□□□□□ -2.11
RTF1Q92541 MIR302D-201ENST00000362275 68 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 Y_RNA.164-201ENST00000363709 102 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 SNORA7.1-201ENST00000363750 139 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 Y_RNA.291-201ENST00000364886 113 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 RPS29P29-201ENST00000456396 171 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 RNU5E-3P-201ENST00000515913 68 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 RNU6-659P-201ENST00000516454 104 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 MIR548AI-201ENST00000579940 88 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 AL359821.1-201ENST00000605519 182 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 AL365222.1-201ENST00000614661 98 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 MIR7111-201ENST00000619751 72 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.88□□□□□ -2.11
RTF1Q92541 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.88□□□□□ -2.11
RTF1Q92541 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RTF1Q92541 RNU6-349P-201ENST00000362402 107 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 SNORD33-201ENST00000362761 85 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 RNY1P6-201ENST00000384193 109 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 RNU6-1154P-201ENST00000391001 104 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 Y_RNA.617-201ENST00000410920 90 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 RNU6-1333P-201ENST00000516162 93 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 RNU7-53P-201ENST00000516705 60 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 MIR4764-201ENST00000580680 88 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 MIR4791-201ENST00000607666 84 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RTF1Q92541 AC243994.1-201ENST00000618627 109 ntBASIC1.87□□□□□ -2.11
RTF1Q92541 WWP1P1-201ENST00000466609 2769 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 AL596211.1-201ENST00000569873 2277 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 MIR302B-201ENST00000362188 73 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 RNU6-235P-201ENST00000362644 107 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 MIR520C-201ENST00000385005 87 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 RNU6-321P-201ENST00000410912 106 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 RNU7-67P-201ENST00000459003 62 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 RNU2-11P-201ENST00000459191 187 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 Y_RNA.712-201ENST00000517011 92 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 MIR4285-201ENST00000581001 85 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 AL357312.1-201ENST00000603879 298 ntBASIC1.86□□□□□ -2.11
RTF1Q92541 SNORD41-201ENST00000386967 70 ntBASIC1.85□□□□□ -2.11
RTF1Q92541 SNX2P2-201ENST00000424553 323 ntBASIC1.85□□□□□ -2.11
RTF1Q92541 HSPE1P24-201ENST00000450782 238 ntBASIC1.85□□□□□ -2.11
RTF1Q92541 RNU7-73P-201ENST00000458743 63 ntBASIC1.85□□□□□ -2.11
RTF1Q92541 AC005908.1-201ENST00000468701 347 ntBASIC1.85□□□□□ -2.11
RTF1Q92541 RNU6-970P-201ENST00000516312 107 ntBASIC1.85□□□□□ -2.11
RTF1Q92541 AC108081.1-201ENST00000604358 221 ntBASIC1.85□□□□□ -2.11
RTF1Q92541 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
RTF1Q92541 AC008133.2-201ENST00000624540 351 ntBASIC1.85□□□□□ -2.11
RTF1Q92541 MIR342-201ENST00000362212 99 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 Y_RNA.4-201ENST00000362333 112 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 RNA5SP205-201ENST00000364653 136 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 SNORD1A-201ENST00000364968 72 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 RNU6-690P-201ENST00000365242 106 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 SNORA51.10-201ENST00000384418 136 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 SNORA22C-201ENST00000384614 134 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 MIR320A-201ENST00000385302 82 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 TRMT112P2-201ENST00000512910 132 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 RN7SKP19-201ENST00000516016 252 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 GHRLOS.1-201ENST00000610995 70 ntBASIC1.84□□□□□ -2.11
RTF1Q92541 Y_RNA.261-201ENST00000364631 102 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 Y_RNA.563-201ENST00000384707 108 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 MIR1287-201ENST00000408492 90 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 RNU7-107P-201ENST00000459121 61 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 AC079140.2-201ENST00000506193 142 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 AC008834.1-201ENST00000511612 175 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 RNU6-772P-201ENST00000516042 105 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 RNU6-240P-201ENST00000516098 97 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 298.3 ms