Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SCARNA8-201ENST00000515924 131 ntBASIC1.34□□□□□ -2.19
PCGF1Q9BSM1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
PCGF1Q9BSM1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 RNU4-17P-201ENST00000365598 141 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 SNORD38C-201ENST00000384381 69 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 MT-TT-201ENST00000387460 66 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 SNORA17.3-201ENST00000391159 129 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 RNY3P16-201ENST00000516338 101 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 RNU6-453P-201ENST00000516819 85 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 RN7SKP88-201ENST00000516847 250 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 AL357312.1-201ENST00000603879 298 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 7SK.8-201ENST00000612110 250 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 7SK.11-201ENST00000615477 250 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 Pinc.1-201ENST00000616452 154 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 7SK.13-201ENST00000622040 250 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCGF1Q9BSM1 AP000648.3-201ENST00000623539 4507 ntBASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 MIR15B-201ENST00000385045 98 ntBASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 MIR616-201ENST00000385293 97 ntBASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 RN7SKP164-201ENST00000516138 266 ntBASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 RNU4-71P-201ENST00000516258 113 ntBASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 SNORA18.7-201ENST00000516910 131 ntBASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 SNORA74.3-201ENST00000517108 154 ntBASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 AL391903.3-201ENST00000612158 163 ntBASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
PCGF1Q9BSM1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 MIR378A-201ENST00000362177 66 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 RNY1-201ENST00000364228 113 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.486-201ENST00000384398 107 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.626-201ENST00000411288 95 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 SNORD123-201ENST00000459473 70 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 COX6CP14-201ENST00000469580 174 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 RNU6-830P-201ENST00000516353 107 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 SNORD111.1-201ENST00000516421 86 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 MIR4662B-201ENST00000579498 81 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 MIR4303-201ENST00000581299 66 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
PCGF1Q9BSM1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.308-201ENST00000365043 101 ntBASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.401-201ENST00000383965 117 ntBASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 AL606845.1-201ENST00000404881 255 ntBASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.618-201ENST00000410949 107 ntBASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 AL096861.1-201ENST00000610899 123 ntBASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 AC015726.2-201ENST00000620112 122 ntBASIC1.3□□□□□ -2.2
PCGF1Q9BSM1 RNU1-42P-201ENST00000364033 160 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 RNU6-484P-201ENST00000384016 107 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 RNY3P5-201ENST00000384127 102 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 MIR517C-201ENST00000385103 95 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 RNU6-1228P-201ENST00000391014 107 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 SNORA67.6-201ENST00000391093 99 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 RNU4-62P-201ENST00000410125 130 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 AL603825.1-201ENST00000438481 80 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 RNU7-25P-201ENST00000516544 62 ntBASIC1.29□□□□□ -2.2
PCGF1Q9BSM1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.188-201ENST00000363952 111 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.489-201ENST00000384410 101 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 RNU6-493P-201ENST00000391321 108 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 MIR548O-201ENST00000408583 114 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 Y_RNA.622-201ENST00000411091 108 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 SNRPGP8-201ENST00000454064 226 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 AC108729.3-201ENST00000513484 108 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 RNU4-57P-201ENST00000515980 135 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 RNU6-1271P-201ENST00000517049 105 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 MIR4764-201ENST00000580680 88 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 MIR3192-201ENST00000584920 77 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 AL512598.1-201ENST00000610158 273 ntBASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
PCGF1Q9BSM1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 RNU6-923P-201ENST00000364753 107 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 RNU6-60P-201ENST00000364792 103 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 MIR520C-201ENST00000385005 87 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 SNORD28B-201ENST00000390993 75 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 RNU2-55P-201ENST00000411146 174 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 BTF3P4-201ENST00000418852 495 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 RPL39P39-201ENST00000455840 151 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 snoU13.25-201ENST00000458945 104 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 AC023790.1-201ENST00000482174 347 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 RNU7-43P-201ENST00000516554 64 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 RNU6-126P-201ENST00000516685 103 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 MIR548AR-201ENST00000582191 57 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 AL645939.4-201ENST00000604495 135 ntBASIC1.27□□□□□ -2.21
PCGF1Q9BSM1 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms