Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 RNU6-1094P-201ENST00000362416 104 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 SNORA58B-201ENST00000364259 136 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 RNA5SP42-201ENST00000364278 115 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 RNA5SP130-201ENST00000364431 114 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 SNORA2B-201ENST00000384583 137 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 SCARNA16.3-201ENST00000516595 184 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 RNA5SP481-201ENST00000516814 122 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 AC008133.2-201ENST00000624540 351 ntBASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP3-1Q9BYR8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP3-1Q9BYR8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.1
KRTAP3-1Q9BYR8 MIR184-201ENST00000384962 84 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 RNA5SP465-201ENST00000391195 109 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 AC104389.3-201ENST00000445629 235 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 RPS29P33-201ENST00000456717 146 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 NDUFB9P3-201ENST00000521269 501 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 AC133485.1-201ENST00000567176 124 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR4425-201ENST00000580572 84 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 Mico1.1-201ENST00000611698 204 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 AC022202.1-201ENST00000613515 211 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 AP000346.3-201ENST00000622821 210 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 MAPK10-373ENST00000641983 6772 ntBASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP3-1Q9BYR8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 HSBP1P2-201ENST00000299671 229 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR192-201ENST00000384915 110 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR627-201ENST00000384979 97 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU6-380P-201ENST00000410207 107 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 SNORA57.3-201ENST00000411095 141 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 SCARNA14-201ENST00000516903 136 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 AC022695.1-201ENST00000522089 237 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 AC244505.7-201ENST00000599675 272 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 AC020891.4-201ENST00000605745 93 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 RNVU1-4-201ENST00000612985 164 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP3-1Q9BYR8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR30E-201ENST00000362104 92 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 RNA5SP133-201ENST00000363368 119 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 RNA5SP424-201ENST00000390988 115 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 RPS26P8-201ENST00000393490 348 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 RNA5SP237-201ENST00000410414 113 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 Y_RNA.625-201ENST00000411256 107 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 AL356095.1-201ENST00000417217 199 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 RPS29P11-201ENST00000496507 171 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 AC114801.3-201ENST00000510231 177 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 SNORA25.13-201ENST00000516395 103 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 RNA5SP137-201ENST00000516833 135 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 AC008011.1-201ENST00000545989 227 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 AC008745.1-201ENST00000604064 271 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 AP000753.3-201ENST00000604083 169 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 SNORA51-201ENST00000606420 132 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR6867-201ENST00000610636 67 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR8066-201ENST00000617280 78 ntBASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP3-1Q9BYR8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 AC092435.3-201ENST00000565538 3654 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR424-201ENST00000362227 98 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU4-32P-201ENST00000363404 141 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU6-590P-201ENST00000365039 107 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 SNORA48.1-201ENST00000390879 135 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 AC017083.1-201ENST00000428093 483 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 AC087499.7-201ENST00000441958 109 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR4277-201ENST00000578298 84 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR4764-201ENST00000580680 88 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR5096-201ENST00000583713 70 ntBASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms