Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC092427.1-202ENST00000430569 476 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 SNRPGP10-201ENST00000432323 225 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 AC233266.1-201ENST00000454518 96 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 MRPS17P9-201ENST00000511924 393 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 RN7SKP19-201ENST00000516016 252 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 Y_RNA.714-201ENST00000517065 90 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 AC007536.1-201ENST00000533382 349 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 MIR3613-201ENST00000579844 87 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 AC087685.1-201ENST00000587507 141 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 AC242852.1-201ENST00000612151 96 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 AC244015.1-201ENST00000622301 99 ntBASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM56Q9BRZ2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 Y_RNA.253-201ENST00000364562 112 ntBASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 RNU6-1292P-201ENST00000383856 107 ntBASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 RN7SL863P-201ENST00000462370 296 ntBASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 NDUFA4P2-201ENST00000489989 244 ntBASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 AL358944.1-201ENST00000528537 144 ntBASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 MIR4679-2-201ENST00000578358 77 ntBASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 AC007318.2-201ENST00000620999 243 ntBASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM56Q9BRZ2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 SNORD24-201ENST00000383884 75 ntBASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 RNU6-880P-201ENST00000384526 107 ntBASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 Z96811.1-201ENST00000445880 108 ntBASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 RNU6-341P-201ENST00000516973 96 ntBASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 MIR3129-201ENST00000581095 76 ntBASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 AC025166.1-201ENST00000612411 163 ntBASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 MIR338-201ENST00000636369 67 ntBASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM56Q9BRZ2 MTND5P32-201ENST00000560711 1802 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 Y_RNA.43-201ENST00000362670 111 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 RNA5SP374-201ENST00000362939 125 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 SNORA54-201ENST00000384281 123 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 RN7SKP123-201ENST00000410732 291 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 RNU4-47P-201ENST00000410876 114 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 ATP5J2P3-201ENST00000451550 258 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 AL021397.1-201ENST00000451806 248 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 RNU7-94P-201ENST00000459576 63 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 RN7SL504P-201ENST00000494496 287 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 RNU6-781P-201ENST00000516377 101 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 RNU6-1291P-201ENST00000516591 104 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 AC024995.1-201ENST00000523014 93 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 AC026271.5-201ENST00000577873 130 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 AC008507.4-201ENST00000585464 127 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 MIR6079-201ENST00000635807 62 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 AL365361.1-201ENST00000566942 3481 ntBASIC3.09□□□□□ -1.91
TRIM56Q9BRZ2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-888P-201ENST00000363010 101 ntBASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 SNORA7.4-201ENST00000384249 137 ntBASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 MIRLET7F2-201ENST00000385277 83 ntBASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 RNU1-142P-201ENST00000516682 145 ntBASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 RNU7-128P-201ENST00000517247 62 ntBASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 MIR6852-201ENST00000621699 66 ntBASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 AL136360.1-201ENST00000503377 1900 ntBASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM56Q9BRZ2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 Y_RNA.35-201ENST00000362601 101 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 Y_RNA.309-201ENST00000365046 111 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-147P-201ENST00000383983 107 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 SNORA1-201ENST00000384107 130 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 SNORA12.1-201ENST00000390873 148 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 RNA5SP274-201ENST00000410484 108 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 CST2P1-201ENST00000425770 87 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 AC104389.3-201ENST00000445629 235 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 Y_RNA.649-201ENST00000459077 103 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 Y_RNA.651-201ENST00000459380 103 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 AC096725.1-201ENST00000514266 313 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-113P-201ENST00000516653 101 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-1270P-201ENST00000517128 108 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 RNA5SP170-201ENST00000517150 101 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM56Q9BRZ2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-1298P-201ENST00000362456 101 ntBASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-508P-201ENST00000363231 103 ntBASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 Y_RNA.267-201ENST00000364679 109 ntBASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 SNORD61-201ENST00000384252 73 ntBASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 RNA5SP323-201ENST00000391094 133 ntBASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 S100A11P2-201ENST00000467589 312 ntBASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 RPL23AP94-201ENST00000512518 302 ntBASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-1041P-201ENST00000516254 102 ntBASIC3.06□□□□□ -1.92
TRIM56Q9BRZ2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms