Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.12□□□□□ -2.59
MLH3Q9UHC1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.12□□□□□ -2.59
MLH3Q9UHC1 AP000907.4-201ENST00000604143 237 ntBASIC-1.12□□□□□ -2.59
MLH3Q9UHC1 AL139022.2-201ENST00000606934 443 ntBASIC-1.12□□□□□ -2.59
MLH3Q9UHC1 AC092574.1-201ENST00000609771 420 ntBASIC-1.12□□□□□ -2.59
MLH3Q9UHC1 SNORD45.3-201ENST00000363836 72 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 RNU6-811P-201ENST00000384069 107 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 ELOCP21-201ENST00000412558 336 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 AC117522.1-201ENST00000509821 380 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 RNA5SP470-201ENST00000516463 106 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 FRG2DP-202ENST00000566967 323 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 MIR544B-201ENST00000582372 78 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 AC245008.1-201ENST00000608123 476 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 AC078880.5-201ENST00000617845 421 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 SNORA43.4-201ENST00000629559 138 ntBASIC-1.13□□□□□ -2.59
MLH3Q9UHC1 AC243428.1-201ENST00000421099 264 ntBASIC-1.14□□□□□ -2.59
MLH3Q9UHC1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.14□□□□□ -2.59
MLH3Q9UHC1 AC120024.3-201ENST00000603167 156 ntBASIC-1.14□□□□□ -2.59
MLH3Q9UHC1 AC144521.1-201ENST00000607148 956 ntBASIC-1.14□□□□□ -2.59
MLH3Q9UHC1 AC073343.1-201ENST00000328239 651 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 U8.5-201ENST00000364528 136 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 MIR15B-201ENST00000385045 98 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 AC114878.1-201ENST00000441166 358 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 AC090572.1-201ENST00000519251 160 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 MIR4441-201ENST00000582623 100 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 AC091178.2-201ENST00000584401 117 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 AP000753.3-201ENST00000604083 169 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 AC091304.10-201ENST00000641554 121 ntBASIC-1.15□□□□□ -2.59
MLH3Q9UHC1 RNU4-16P-201ENST00000364737 141 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 RNU6-24P-201ENST00000384440 107 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 MTND1P32-201ENST00000433043 938 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 RNA5SP169-201ENST00000517268 117 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 AC068587.5-201ENST00000528506 175 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 MIR3115-201ENST00000577915 68 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 MIR3925-201ENST00000584674 77 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 MTATP6P2-201ENST00000603319 678 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 AC063944.3-201ENST00000609969 533 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 SCARNA4-201ENST00000629045 128 ntBASIC-1.16□□□□□ -2.59
MLH3Q9UHC1 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 RNU4-21P-201ENST00000362802 126 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 MIR125B2-201ENST00000385128 89 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 RNU6-205P-201ENST00000390858 107 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 AL353572.1-201ENST00000442490 417 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 RN7SKP19-201ENST00000516016 252 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 RNU6-430P-201ENST00000517078 107 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 RNA5SP454-201ENST00000517231 127 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 AP003168.1-201ENST00000530091 307 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 MIR548AD-201ENST00000584780 82 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 SNORD92-201ENST00000585078 85 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 AC073539.2-201ENST00000597113 165 ntBASIC-1.17□□□□□ -2.6
MLH3Q9UHC1 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 SNORD114-25-201ENST00000363742 72 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 MIR1284-201ENST00000408337 120 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 RNU2-54P-201ENST00000410299 190 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 AC114491.1-201ENST00000416095 246 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 SNORD123-201ENST00000459473 70 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 MTND1P8-201ENST00000571424 950 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 AC006380.1-201ENST00000603598 186 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 RNU6-883P-201ENST00000384597 107 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 MIR501-201ENST00000390204 84 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 AC244250.2-201ENST00000418731 148 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 CALM2P2-201ENST00000428512 440 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 SUMO1P3-201ENST00000439961 304 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 snoU13.6-201ENST00000458785 104 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 RNU7-156P-201ENST00000517214 74 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 MIR4752-201ENST00000579672 72 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 AP001836.1-201ENST00000604675 523 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 AC072039.2-201ENST00000608883 439 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 AC008873.1-201ENST00000625051 138 ntBASIC-1.18□□□□□ -2.6
MLH3Q9UHC1 MIR101-2-201ENST00000362195 79 ntBASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 RNY4P6-201ENST00000363667 96 ntBASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 AC117470.1-201ENST00000381974 330 ntBASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 SNORA26.5-201ENST00000391215 123 ntBASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 MTCO2P33-201ENST00000402100 465 ntBASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 RNU6-504P-201ENST00000516568 104 ntBASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 AL445523.1-201ENST00000451184 1362 ntBASIC-1.19□□□□□ -2.6
MLH3Q9UHC1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.2□□□□□ -2.6
MLH3Q9UHC1 MIR148A-201ENST00000362215 68 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms