Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 ELOCP24-201ENST00000456370 334 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 COX6CP14-201ENST00000469580 174 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 AC010469.2-201ENST00000496412 480 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 SNORA40.9-201ENST00000515895 93 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 AC011476.5-201ENST00000615594 130 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 RMST_2.1-201ENST00000617263 136 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 AC073544.1-201ENST00000600110 1595 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 AC100821.1-201ENST00000523153 2479 ntBASIC1.15□□□□□ -2.22
NKX2-6A6NCS4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 RNU4-73P-201ENST00000363164 141 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 RNU6-961P-201ENST00000363893 105 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 SNORA63D-201ENST00000364359 132 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 MIR625-201ENST00000385047 85 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 AC008134.1-201ENST00000420943 193 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 MTND4P28-201ENST00000426217 387 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 NDUFB4P10-201ENST00000452541 359 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 RNU6-625P-201ENST00000459412 107 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 SNORD19B-201ENST00000459623 84 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 HMGN1P13-201ENST00000505795 138 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 FGF7P4-201ENST00000509595 295 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 RNU6-408P-201ENST00000515910 100 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 RN7SKP49-201ENST00000516675 260 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 RNU7-128P-201ENST00000517247 62 ntBASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.80-201ENST00000362996 102 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 RNU5F-3P-201ENST00000363767 117 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 SNORA20B-201ENST00000384220 132 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.485-201ENST00000384395 102 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 RAB28P5-201ENST00000427490 651 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 UBE2V1P7-201ENST00000446395 340 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 RPS27P1-201ENST00000450552 247 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 RPS27P22-201ENST00000478056 241 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 RNU1-142P-201ENST00000516682 145 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 SNORA77B-201ENST00000578179 125 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 AC022217.4-201ENST00000604389 163 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 MIR8074-201ENST00000615081 81 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 U6.73-201ENST00000619194 103 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 AC138305.3-201ENST00000624988 240 ntBASIC1.14□□□□□ -2.23
NKX2-6A6NCS4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 MIR26B-201ENST00000362251 77 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 RNU6-1266P-201ENST00000362794 105 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 RNU6-414P-201ENST00000363705 104 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 RNU6-407P-201ENST00000365280 104 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 RNU6-1040P-201ENST00000383974 107 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.419-201ENST00000384041 102 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.463-201ENST00000384271 102 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.496-201ENST00000384444 101 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 RNU6-136P-201ENST00000384663 107 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 EBAG9P1-201ENST00000418955 543 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 AF228730.4-201ENST00000421457 183 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 MTND4LP11-201ENST00000422184 280 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 RPL26P26-201ENST00000480251 434 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.661-201ENST00000516003 99 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 SNORA31.10-201ENST00000516482 106 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 AC023442.1-201ENST00000531247 422 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 MIR4438-201ENST00000585271 93 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 AL929325.1-201ENST00000603096 117 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 AL359075.3-201ENST00000613288 217 ntBASIC1.13□□□□□ -2.23
NKX2-6A6NCS4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 RNU6-490P-201ENST00000362985 107 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 MIR30A-201ENST00000385092 71 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 MIR758-201ENST00000390227 88 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.579-201ENST00000390939 94 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 MTCO2P27-201ENST00000420740 428 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 TOMM22P2-201ENST00000430735 237 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 MTND3P22-201ENST00000510932 243 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 RNU6-966P-201ENST00000516479 104 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 RAB11AP2-201ENST00000545905 639 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 AL137100.2-201ENST00000555786 315 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 AC133104.2-201ENST00000615272 193 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 AC004467.1-201ENST00000615678 330 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 MIR8063-201ENST00000621930 81 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 MIR3674-201ENST00000636576 68 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.12□□□□□ -2.23
NKX2-6A6NCS4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 RNU4-79P-201ENST00000362764 141 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 RNU6-271P-201ENST00000363858 105 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.187-201ENST00000363918 113 ntBASIC1.11□□□□□ -2.23
NKX2-6A6NCS4 Y_RNA.315-201ENST00000365117 102 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms