Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.26□□□□□ -2.05
MMP3P08254 CR769767.1-201ENST00000436337 346 ntBASIC2.26□□□□□ -2.05
MMP3P08254 HMGN2P18-201ENST00000450680 270 ntBASIC2.26□□□□□ -2.05
MMP3P08254 PCNPP5-201ENST00000452246 481 ntBASIC2.26□□□□□ -2.05
MMP3P08254 AC098869.1-201ENST00000481627 292 ntBASIC2.26□□□□□ -2.05
MMP3P08254 RNU6-344P-201ENST00000516635 111 ntBASIC2.26□□□□□ -2.05
MMP3P08254 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.26□□□□□ -2.05
MMP3P08254 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
MMP3P08254 AP002001.1-203ENST00000534002 267 ntBASIC2.26□□□□□ -2.05
MMP3P08254 AP000942.3-201ENST00000603702 160 ntBASIC2.26□□□□□ -2.05
MMP3P08254 AC022202.1-201ENST00000613515 211 ntBASIC2.26□□□□□ -2.05
MMP3P08254 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.26□□□□□ -2.05
MMP3P08254 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.26□□□□□ -2.05
MMP3P08254 AC068205.3-201ENST00000636385 468 ntBASIC2.26□□□□□ -2.05
MMP3P08254 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
MMP3P08254 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.26□□□□□ -2.05
MMP3P08254 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
MMP3P08254 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
MMP3P08254 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
MMP3P08254 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
MMP3P08254 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
MMP3P08254 Y_RNA.19-201ENST00000362462 99 ntBASIC2.25□□□□□ -2.05
MMP3P08254 RNU5F-3P-201ENST00000363767 117 ntBASIC2.25□□□□□ -2.05
MMP3P08254 SNORA63.7-201ENST00000365579 123 ntBASIC2.25□□□□□ -2.05
MMP3P08254 RNU6-20P-201ENST00000384106 107 ntBASIC2.25□□□□□ -2.05
MMP3P08254 MIR568-201ENST00000385036 95 ntBASIC2.25□□□□□ -2.05
MMP3P08254 RPL21P38-201ENST00000418090 167 ntBASIC2.25□□□□□ -2.05
MMP3P08254 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.25□□□□□ -2.05
MMP3P08254 CYCSP49-201ENST00000420810 319 ntBASIC2.25□□□□□ -2.05
MMP3P08254 RAB28P5-201ENST00000427490 651 ntBASIC2.25□□□□□ -2.05
MMP3P08254 AC005002.2-201ENST00000438228 269 ntBASIC2.25□□□□□ -2.05
MMP3P08254 AC016717.1-201ENST00000448918 286 ntBASIC2.25□□□□□ -2.05
MMP3P08254 AL139109.1-201ENST00000455491 297 ntBASIC2.25□□□□□ -2.05
MMP3P08254 HMGN2P9-201ENST00000476875 229 ntBASIC2.25□□□□□ -2.05
MMP3P08254 AC121758.2-201ENST00000553271 193 ntBASIC2.25□□□□□ -2.05
MMP3P08254 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
MMP3P08254 AL109918.3-201ENST00000603072 338 ntBASIC2.25□□□□□ -2.05
MMP3P08254 Y_RNA.772-201ENST00000606692 102 ntBASIC2.25□□□□□ -2.05
MMP3P08254 AC130454.1-201ENST00000622948 401 ntBASIC2.25□□□□□ -2.05
MMP3P08254 Y_RNA.47-201ENST00000362697 108 ntBASIC2.24□□□□□ -2.05
MMP3P08254 Y_RNA.498-201ENST00000384460 102 ntBASIC2.24□□□□□ -2.05
MMP3P08254 Y_RNA.574-201ENST00000384766 95 ntBASIC2.24□□□□□ -2.05
MMP3P08254 MIR583-201ENST00000384846 75 ntBASIC2.24□□□□□ -2.05
MMP3P08254 MIR561-201ENST00000385216 97 ntBASIC2.24□□□□□ -2.05
MMP3P08254 AC019129.1-201ENST00000403786 261 ntBASIC2.24□□□□□ -2.05
MMP3P08254 RNU4-30P-201ENST00000410245 143 ntBASIC2.24□□□□□ -2.05
MMP3P08254 AC009238.1-201ENST00000442165 424 ntBASIC2.24□□□□□ -2.05
MMP3P08254 AC009237.6-201ENST00000446969 424 ntBASIC2.24□□□□□ -2.05
MMP3P08254 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.24□□□□□ -2.05
MMP3P08254 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.24□□□□□ -2.05
MMP3P08254 LINC01399-202ENST00000458450 244 ntBASIC2.24□□□□□ -2.05
MMP3P08254 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.24□□□□□ -2.05
MMP3P08254 RNU6-966P-201ENST00000516479 104 ntBASIC2.24□□□□□ -2.05
MMP3P08254 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
MMP3P08254 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.24□□□□□ -2.05
MMP3P08254 AC110588.1-201ENST00000559699 137 ntBASIC2.24□□□□□ -2.05
MMP3P08254 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.24□□□□□ -2.05
MMP3P08254 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.24□□□□□ -2.05
MMP3P08254 AL137847.3-201ENST00000611521 109 ntBASIC2.24□□□□□ -2.05
MMP3P08254 MIR376A1-201ENST00000616574 68 ntBASIC2.24□□□□□ -2.05
MMP3P08254 AC010205.1-201ENST00000616668 449 ntBASIC2.24□□□□□ -2.05
MMP3P08254 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.24□□□□□ -2.05
MMP3P08254 Y_RNA.4-201ENST00000362333 112 ntBASIC2.23□□□□□ -2.05
MMP3P08254 RNU1-17P-201ENST00000363022 152 ntBASIC2.23□□□□□ -2.05
MMP3P08254 RNU6-626P-201ENST00000363354 107 ntBASIC2.23□□□□□ -2.05
MMP3P08254 Y_RNA.152-201ENST00000363578 100 ntBASIC2.23□□□□□ -2.05
MMP3P08254 RNU6-770P-201ENST00000363929 105 ntBASIC2.23□□□□□ -2.05
MMP3P08254 RNU6-438P-201ENST00000365561 103 ntBASIC2.23□□□□□ -2.05
MMP3P08254 RNU6-418P-201ENST00000384035 107 ntBASIC2.23□□□□□ -2.05
MMP3P08254 RNU6-611P-201ENST00000384276 104 ntBASIC2.23□□□□□ -2.05
MMP3P08254 SNORD14D-201ENST00000384390 87 ntBASIC2.23□□□□□ -2.05
MMP3P08254 MIR548B-201ENST00000385247 97 ntBASIC2.23□□□□□ -2.05
MMP3P08254 RNU6-1109P-201ENST00000391187 107 ntBASIC2.23□□□□□ -2.05
MMP3P08254 MRPL35P1-201ENST00000404272 572 ntBASIC2.23□□□□□ -2.05
MMP3P08254 MIR1283-1-201ENST00000408494 87 ntBASIC2.23□□□□□ -2.05
MMP3P08254 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.23□□□□□ -2.05
MMP3P08254 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.23□□□□□ -2.05
MMP3P08254 AC073910.1-201ENST00000445047 438 ntBASIC2.23□□□□□ -2.05
MMP3P08254 RPL23AP3-201ENST00000453844 468 ntBASIC2.23□□□□□ -2.05
MMP3P08254 Y_RNA.673-201ENST00000516306 88 ntBASIC2.23□□□□□ -2.05
MMP3P08254 AC233702.2-202ENST00000562547 291 ntBASIC2.23□□□□□ -2.05
MMP3P08254 MIR4300-201ENST00000581016 96 ntBASIC2.23□□□□□ -2.05
MMP3P08254 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
MMP3P08254 AC008873.1-201ENST00000625051 138 ntBASIC2.23□□□□□ -2.05
MMP3P08254 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.23□□□□□ -2.05
MMP3P08254 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
MMP3P08254 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
MMP3P08254 Y_RNA.164-201ENST00000363709 102 ntBASIC2.22□□□□□ -2.05
MMP3P08254 Y_RNA.183-201ENST00000363882 113 ntBASIC2.22□□□□□ -2.05
MMP3P08254 SNORA38-201ENST00000363946 132 ntBASIC2.22□□□□□ -2.05
MMP3P08254 SNORD31B-201ENST00000364977 69 ntBASIC2.22□□□□□ -2.05
MMP3P08254 RNU6-102P-201ENST00000384485 104 ntBASIC2.22□□□□□ -2.05
MMP3P08254 SNORA80E-201ENST00000384744 137 ntBASIC2.22□□□□□ -2.05
MMP3P08254 MIR215-201ENST00000384858 110 ntBASIC2.22□□□□□ -2.05
MMP3P08254 Y_RNA.602-201ENST00000410535 92 ntBASIC2.22□□□□□ -2.05
MMP3P08254 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.22□□□□□ -2.05
MMP3P08254 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.22□□□□□ -2.05
MMP3P08254 IPO7P1-201ENST00000442031 636 ntBASIC2.22□□□□□ -2.05
MMP3P08254 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
MMP3P08254 PRELID3BP1-201ENST00000457142 540 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms