Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNA5SP281-201ENST00000516504 135 ntBASIC2.03□□□□□ -2.08
HLA-DOBP13765 AL161670.1-201ENST00000554348 137 ntBASIC2.03□□□□□ -2.08
HLA-DOBP13765 AL109918.3-201ENST00000603072 338 ntBASIC2.03□□□□□ -2.08
HLA-DOBP13765 AC011373.1-201ENST00000607270 237 ntBASIC2.03□□□□□ -2.08
HLA-DOBP13765 U4.1-201ENST00000620349 87 ntBASIC2.03□□□□□ -2.08
HLA-DOBP13765 MIR6852-201ENST00000621699 66 ntBASIC2.03□□□□□ -2.08
HLA-DOBP13765 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HLA-DOBP13765 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
HLA-DOBP13765 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
HLA-DOBP13765 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DOBP13765 Y_RNA.222-201ENST00000364264 102 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 Y_RNA.332-201ENST00000365271 113 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 RNU6-975P-201ENST00000384296 105 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 Y_RNA.512-201ENST00000384518 102 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 MIR548B-201ENST00000385247 97 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 Y_RNA.581-201ENST00000391017 97 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 SRIP3-201ENST00000413200 219 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DOBP13765 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 SNORA31.11-201ENST00000516528 139 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 RNU2-34P-201ENST00000516534 121 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 PRELID2P1-201ENST00000552837 301 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 MIR4503-201ENST00000582187 83 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DOBP13765 AP000942.4-201ENST00000604811 241 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 SNORD113-5-201ENST00000607261 78 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 FO624990.1-201ENST00000636373 85 ntBASIC2.02□□□□□ -2.09
HLA-DOBP13765 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DOBP13765 SNORD113-8-201ENST00000363497 74 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 SNORA38-201ENST00000363946 132 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU6-1175P-201ENST00000365200 107 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 Y_RNA.461-201ENST00000384263 103 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU6-1072P-201ENST00000384703 107 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU6-21P-201ENST00000384710 107 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU6-443P-201ENST00000384780 107 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 MIR634-201ENST00000385208 97 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 MIR1302-6-201ENST00000408466 90 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 MIR1185-2-201ENST00000408687 86 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU2-20P-201ENST00000410425 191 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RPL23AP36-201ENST00000413895 458 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RPL21P38-201ENST00000418090 167 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 AC123900.1-201ENST00000420390 96 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 AC096920.1-201ENST00000423991 241 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU7-57P-201ENST00000459540 60 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 SEPT14P8-201ENST00000508026 178 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU6-991P-201ENST00000516168 107 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU6-948P-201ENST00000516374 107 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU7-110P-201ENST00000516891 62 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 AP002001.1-203ENST00000534002 267 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 AC004817.2-201ENST00000561794 651 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DOBP13765 MIR3149-201ENST00000584629 83 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 AC004467.1-201ENST00000615678 330 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.01□□□□□ -2.09
HLA-DOBP13765 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DOBP13765 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DOBP13765 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DOBP13765 RNU4-82P-201ENST00000362443 140 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 SNORD81.1-201ENST00000363064 77 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DOBP13765 RNU6-1235P-201ENST00000384559 107 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 MIR221-201ENST00000385135 110 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 EDDM3CP-201ENST00000415977 425 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DOBP13765 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DOBP13765 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DOBP13765 AC005042.3-201ENST00000453230 174 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 PRELID3BP1-201ENST00000457142 540 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 RNU6-498P-201ENST00000459468 107 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DOBP13765 AC055872.1-201ENST00000570978 278 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 MIR3684-201ENST00000579779 74 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 AL049779.4-201ENST00000604500 156 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 AC022441.3-201ENST00000605737 136 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 Six3os1_7.1-201ENST00000621512 201 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 AC091932.3-201ENST00000624223 323 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 snoZ196.1-201ENST00000625269 89 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 IGHVIII-44-202ENST00000636235 289 ntBASIC2□□□□□ -2.09
HLA-DOBP13765 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DOBP13765 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DOBP13765 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DOBP13765 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DOBP13765 MIR449A-201ENST00000362113 91 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 RNU4-90P-201ENST00000362773 141 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 snoU2_19.2-201ENST00000363024 80 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 Y_RNA.99-201ENST00000363138 105 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 Y_RNA.193-201ENST00000363979 102 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 RNU6-702P-201ENST00000364982 107 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 Y_RNA.376-201ENST00000365638 108 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 RNU6-574P-201ENST00000384265 107 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 MIR144-201ENST00000384886 86 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 RNU2-54P-201ENST00000410299 190 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 AL357134.1-201ENST00000445848 426 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 RNU6-221P-201ENST00000459541 99 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 TRBVB-201ENST00000477100 408 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 AC098869.1-201ENST00000481627 292 ntBASIC1.99□□□□□ -2.09
HLA-DOBP13765 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DOBP13765 RNU6-496P-201ENST00000516145 99 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms