Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC100830.2-201ENST00000581636 240 ntBASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 U6.42-201ENST00000618440 107 ntBASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 AC090617.9-201ENST00000623751 147 ntBASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 SNORD98-201ENST00000636377 67 ntBASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 SNORD114-11-201ENST00000363738 75 ntBASIC-1.16□□□□□ -2.6
CFAP43Q8NDM7 Y_RNA.234-201ENST00000364409 97 ntBASIC-1.16□□□□□ -2.6
CFAP43Q8NDM7 AL079342.2-201ENST00000403367 482 ntBASIC-1.16□□□□□ -2.6
CFAP43Q8NDM7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.16□□□□□ -2.6
CFAP43Q8NDM7 AC106754.1-201ENST00000562632 1513 ntBASIC-1.16□□□□□ -2.6
CFAP43Q8NDM7 MIR4324-201ENST00000584846 72 ntBASIC-1.16□□□□□ -2.6
CFAP43Q8NDM7 RNU6-378P-201ENST00000384324 107 ntBASIC-1.17□□□□□ -2.6
CFAP43Q8NDM7 MIR300-201ENST00000401138 83 ntBASIC-1.17□□□□□ -2.6
CFAP43Q8NDM7 AC133104.1-201ENST00000429100 218 ntBASIC-1.17□□□□□ -2.6
CFAP43Q8NDM7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.17□□□□□ -2.6
CFAP43Q8NDM7 USP9YP29-201ENST00000445112 563 ntBASIC-1.17□□□□□ -2.6
CFAP43Q8NDM7 NDUFB1P2-201ENST00000449477 176 ntBASIC-1.17□□□□□ -2.6
CFAP43Q8NDM7 AC007215.1-201ENST00000464893 276 ntBASIC-1.17□□□□□ -2.6
CFAP43Q8NDM7 AP001372.4-201ENST00000524889 472 ntBASIC-1.17□□□□□ -2.6
CFAP43Q8NDM7 RNU6-1005P-201ENST00000384519 107 ntBASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 MIR217-201ENST00000384817 110 ntBASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 SNORA26-201ENST00000391286 122 ntBASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 RPL21P38-201ENST00000418090 167 ntBASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 CR383656.4-201ENST00000546909 122 ntBASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 AC091304.9-201ENST00000612091 226 ntBASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 MIR1322-201ENST00000638013 71 ntBASIC-1.18□□□□□ -2.6
CFAP43Q8NDM7 RNU6-161P-201ENST00000363051 106 ntBASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 RNU6-527P-201ENST00000363425 104 ntBASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 MIR891A-201ENST00000401237 79 ntBASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 AL359634.1-202ENST00000404721 284 ntBASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 AC006026.2-201ENST00000457376 180 ntBASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 MTCO3P9-201ENST00000506989 781 ntBASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 RN7SKP164-201ENST00000516138 266 ntBASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 AC110760.3-201ENST00000598794 467 ntBASIC-1.19□□□□□ -2.6
CFAP43Q8NDM7 RNA5SP192-201ENST00000364404 120 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 RNU6-975P-201ENST00000384296 105 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 MIR548L-201ENST00000408303 86 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 AC007547.1-201ENST00000462177 490 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 MIR4441-201ENST00000582623 100 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 AP000568.1-201ENST00000282964 442 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 MIR101-2-201ENST00000362195 79 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 RNU6-78P-201ENST00000362897 107 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 RNU6-1284P-201ENST00000363701 100 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 SNORA3B-201ENST00000391305 131 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 MIR1283-1-201ENST00000408494 87 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 MTCO1P5-201ENST00000433573 344 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 AC093899.1-201ENST00000457984 376 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 RNU6-953P-201ENST00000459154 107 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 AC104383.1-201ENST00000530297 370 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 AC018462.2-201ENST00000605375 395 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 MTND5P33-201ENST00000571250 1450 ntBASIC-1.2□□□□□ -2.6
CFAP43Q8NDM7 Y_RNA.33-201ENST00000362591 102 ntBASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 RNU6-395P-201ENST00000365662 106 ntBASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 RPS3AP3-201ENST00000411933 242 ntBASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 AC109327.2-201ENST00000448339 378 ntBASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 AC116562.3-201ENST00000506136 177 ntBASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 AL133153.1-201ENST00000557756 303 ntBASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 AL117336.2-201ENST00000602435 335 ntBASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 AC064872.1-201ENST00000604823 1072 ntBASIC-1.21□□□□□ -2.6
CFAP43Q8NDM7 RNU6-839P-201ENST00000363347 108 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 RNU6-580P-201ENST00000365159 107 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 MLLT10P1-201ENST00000418346 262 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 RPS24P1-201ENST00000438550 371 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 USP9YP25-201ENST00000457708 443 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 AC010468.3-201ENST00000508225 458 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 AC174048.1-201ENST00000603389 144 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 AL138889.2-201ENST00000603883 242 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 SNORD38B-202ENST00000625943 69 ntBASIC-1.22□□□□□ -2.6
CFAP43Q8NDM7 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 RNU6-364P-201ENST00000384387 107 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 Y_RNA.534-201ENST00000384599 112 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 AC010424.1-201ENST00000506336 297 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 AC133794.1-201ENST00000602731 914 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 AC092104.1-201ENST00000497346 1441 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 RNU6-562P-201ENST00000362731 107 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 U8.5-201ENST00000364528 136 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 MIR1285-2-201ENST00000408311 88 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 RNU7-41P-201ENST00000515917 61 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-1.23□□□□□ -2.61
CFAP43Q8NDM7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 266.8 ms