Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 AC006557.6-201ENST00000623071 864 ntBASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TMEM56-RWDD3S4R434 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 AC087623.3-201ENST00000607047 1098 ntBASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM56-RWDD3S4R434 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms