Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 HOXB1-202ENST00000577092 1414 ntBASIC20.78■□□□□ 0.92
COL1A2P08123 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
COL1A2P08123 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.78■□□□□ 0.92
COL1A2P08123 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
COL1A2P08123 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.78■□□□□ 0.92
COL1A2P08123 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.78■□□□□ 0.92
COL1A2P08123 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.78■□□□□ 0.92
COL1A2P08123 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.78■□□□□ 0.92
COL1A2P08123 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.78■□□□□ 0.92
COL1A2P08123 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.78■□□□□ 0.92
COL1A2P08123 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
COL1A2P08123 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL1A2P08123 AC008556.1-201ENST00000610908 2040 ntBASIC20.77■□□□□ 0.92
COL1A2P08123 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL1A2P08123 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.77■□□□□ 0.92
COL1A2P08123 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.77■□□□□ 0.92
COL1A2P08123 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL1A2P08123 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL1A2P08123 SPDYE13P-201ENST00000445314 798 ntBASIC20.77■□□□□ 0.92
COL1A2P08123 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.77■□□□□ 0.92
COL1A2P08123 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.77■□□□□ 0.92
COL1A2P08123 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
COL1A2P08123 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.77■□□□□ 0.92
COL1A2P08123 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.77■□□□□ 0.92
COL1A2P08123 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.77■□□□□ 0.92
COL1A2P08123 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.77■□□□□ 0.92
COL1A2P08123 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL1A2P08123 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL1A2P08123 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.77■□□□□ 0.92
COL1A2P08123 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
COL1A2P08123 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
COL1A2P08123 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.77■□□□□ 0.91
COL1A2P08123 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COL1A2P08123 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.76■□□□□ 0.91
COL1A2P08123 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.76■□□□□ 0.91
COL1A2P08123 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.76■□□□□ 0.91
COL1A2P08123 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.76■□□□□ 0.91
COL1A2P08123 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
COL1A2P08123 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.76■□□□□ 0.91
COL1A2P08123 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL1A2P08123 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.76■□□□□ 0.91
COL1A2P08123 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL1A2P08123 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.76■□□□□ 0.91
COL1A2P08123 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.76■□□□□ 0.91
COL1A2P08123 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.75■□□□□ 0.91
COL1A2P08123 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
COL1A2P08123 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
COL1A2P08123 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.75■□□□□ 0.91
COL1A2P08123 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.75■□□□□ 0.91
COL1A2P08123 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 MIR3917-201ENST00000580971 93 ntBASIC20.75■□□□□ 0.91
COL1A2P08123 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.75■□□□□ 0.91
COL1A2P08123 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A2P08123 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
COL1A2P08123 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
COL1A2P08123 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.75■□□□□ 0.91
COL1A2P08123 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COL1A2P08123 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.74■□□□□ 0.91
COL1A2P08123 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
COL1A2P08123 MIR564-202ENST00000385049 94 ntBASIC20.74■□□□□ 0.91
COL1A2P08123 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 KRT18P23-201ENST00000435622 1283 ntBASIC20.74■□□□□ 0.91
COL1A2P08123 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.74■□□□□ 0.91
COL1A2P08123 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.74■□□□□ 0.91
COL1A2P08123 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms