Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 AL049812.1-201ENST00000432563 2267 ntBASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 AC004408.2-201ENST00000623613 2777 ntBASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV1A0A0A0MS02 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 HTR7P1-201ENST00000538670 1336 ntBASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 RPPH1-201ENST00000516869 333 ntBASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRGV1A0A0A0MS02 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 IRX1P1-201ENST00000438849 1838 ntBASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms