Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 RNU6-1305P-201ENST00000364353 104 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 RNU4-28P-201ENST00000364739 141 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.35□□□□□ -2.35
UBBP0CG47 RNU6-297P-201ENST00000384636 107 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 RNU6-606P-201ENST00000384721 111 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 MIR487A-201ENST00000385009 80 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 RNA5SP323-201ENST00000391094 133 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 MIR942-201ENST00000401111 86 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AL355796.1-201ENST00000406706 323 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.35□□□□□ -2.35
UBBP0CG47 CDK8P2-201ENST00000415020 547 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 Z99497.1-201ENST00000421282 135 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 ISCA1P6-201ENST00000427740 390 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AC092628.1-201ENST00000436250 252 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.35□□□□□ -2.35
UBBP0CG47 AL049830.1-201ENST00000468034 425 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 CCDC34P1-201ENST00000507441 517 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.35□□□□□ -2.35
UBBP0CG47 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.35□□□□□ -2.35
UBBP0CG47 AC105417.1-201ENST00000514691 285 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 MTATP6P9-201ENST00000515039 680 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 SNORA70.12-201ENST00000516084 153 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 RNU1-142P-201ENST00000516682 145 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 RNU6-430P-201ENST00000517078 107 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AC069113.1-201ENST00000517763 267 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.35□□□□□ -2.35
UBBP0CG47 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.35□□□□□ -2.35
UBBP0CG47 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AC092354.1-201ENST00000606057 376 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 SCARNA4-201ENST00000629045 128 ntBASIC0.35□□□□□ -2.35
UBBP0CG47 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
UBBP0CG47 AP000568.1-201ENST00000282964 442 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 RNU6-199P-201ENST00000362954 107 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
UBBP0CG47 AL034345.1-201ENST00000407768 123 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 RNU6-248P-201ENST00000410720 107 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 AL354692.1-201ENST00000423044 315 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.34□□□□□ -2.36
UBBP0CG47 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.34□□□□□ -2.36
UBBP0CG47 USP9YP29-201ENST00000445112 563 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.34□□□□□ -2.36
UBBP0CG47 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.34□□□□□ -2.36
UBBP0CG47 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.34□□□□□ -2.36
UBBP0CG47 RNU6-344P-201ENST00000516635 111 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 AL137161.1-201ENST00000532231 390 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 MRPS36P4-201ENST00000534436 298 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.34□□□□□ -2.36
UBBP0CG47 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.34□□□□□ -2.36
UBBP0CG47 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.34□□□□□ -2.36
UBBP0CG47 MIR3941-201ENST00000582572 103 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 FAM106DP-201ENST00000586416 501 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 AC068790.6-201ENST00000602558 258 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 AP000907.4-201ENST00000604143 237 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 AC004832.4-201ENST00000608952 331 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 AL096861.1-201ENST00000610899 123 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 AL391903.3-201ENST00000612158 163 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 U6.73-201ENST00000619194 103 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.34□□□□□ -2.36
UBBP0CG47 AL442644.1-201ENST00000454390 3105 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 AC023934.1-201ENST00000574529 2389 ntBASIC0.34□□□□□ -2.36
UBBP0CG47 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
UBBP0CG47 MIR337-201ENST00000362281 93 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 RNU5F-7P-201ENST00000363696 115 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 RNA5SP499-201ENST00000363982 119 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 RNU6-1240P-201ENST00000365155 104 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 RNU6-424P-201ENST00000384367 105 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 SNORD116-13-201ENST00000384408 92 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 RNU6-903P-201ENST00000391270 109 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
UBBP0CG47 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
UBBP0CG47 MIR1253-201ENST00000408273 105 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 AC008134.1-201ENST00000420943 193 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.33□□□□□ -2.36
UBBP0CG47 RNU7-180P-201ENST00000459240 63 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 RNU7-138P-201ENST00000459479 64 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 AC113410.1-201ENST00000505029 247 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.33□□□□□ -2.36
UBBP0CG47 AC025465.4-201ENST00000513422 638 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 RNU6-1053P-201ENST00000515930 101 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 AP002001.1-203ENST00000534002 267 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.33□□□□□ -2.36
UBBP0CG47 AC018659.1-201ENST00000551083 169 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.33□□□□□ -2.36
UBBP0CG47 FRG2DP-202ENST00000566967 323 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 MIR4714-201ENST00000580728 77 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 MIR3682-201ENST00000581338 84 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 MIR4781-201ENST00000585250 76 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 AC025449.1-201ENST00000603896 529 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 MIR98-201ENST00000606724 119 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 RMST_3.1-201ENST00000611651 109 ntBASIC0.33□□□□□ -2.36
UBBP0CG47 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
UBBP0CG47 CASC19-280ENST00000642102 1351 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 RNU4-12P-201ENST00000365233 139 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 RNU2-29P-201ENST00000410423 189 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 RNA5SP494-201ENST00000410653 129 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.32□□□□□ -2.36
UBBP0CG47 CALM2P4-201ENST00000430810 426 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms