Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
KLF4O43474 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KLF4O43474 RNU2-38P-201ENST00000410856 79 ntBASIC3.29□□□□□ -1.88
KLF4O43474 RNU6-847P-201ENST00000411115 108 ntBASIC3.29□□□□□ -1.88
KLF4O43474 AC003685.2-201ENST00000422795 395 ntBASIC3.29□□□□□ -1.88
KLF4O43474 POLR2KP2-201ENST00000438155 177 ntBASIC3.29□□□□□ -1.88
KLF4O43474 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.29□□□□□ -1.88
KLF4O43474 RNU6-1231P-201ENST00000517185 103 ntBASIC3.29□□□□□ -1.88
KLF4O43474 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.29□□□□□ -1.88
KLF4O43474 MIR3684-201ENST00000579779 74 ntBASIC3.29□□□□□ -1.88
KLF4O43474 AC019176.2-201ENST00000611579 315 ntBASIC3.29□□□□□ -1.88
KLF4O43474 AC068647.1-201ENST00000489539 2265 ntBASIC3.29□□□□□ -1.88
KLF4O43474 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.29□□□□□ -1.88
KLF4O43474 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.28□□□□□ -1.88
KLF4O43474 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.28□□□□□ -1.88
KLF4O43474 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KLF4O43474 Y_RNA.237-201ENST00000364439 102 ntBASIC3.28□□□□□ -1.88
KLF4O43474 SNORA67.2-201ENST00000384300 149 ntBASIC3.28□□□□□ -1.88
KLF4O43474 MIR184-201ENST00000384962 84 ntBASIC3.28□□□□□ -1.88
KLF4O43474 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KLF4O43474 AC106707.2-201ENST00000484182 374 ntBASIC3.28□□□□□ -1.88
KLF4O43474 AC104619.4-201ENST00000510773 249 ntBASIC3.28□□□□□ -1.88
KLF4O43474 RNU2-31P-201ENST00000516954 155 ntBASIC3.28□□□□□ -1.88
KLF4O43474 AC008749.1-201ENST00000597650 306 ntBASIC3.28□□□□□ -1.88
KLF4O43474 AP001282.2-201ENST00000616149 309 ntBASIC3.28□□□□□ -1.88
KLF4O43474 AC022149.2-201ENST00000621061 203 ntBASIC3.28□□□□□ -1.88
KLF4O43474 AC091932.3-201ENST00000624223 323 ntBASIC3.28□□□□□ -1.88
KLF4O43474 IGHVIII-44-202ENST00000636235 289 ntBASIC3.28□□□□□ -1.88
KLF4O43474 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
KLF4O43474 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KLF4O43474 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KLF4O43474 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KLF4O43474 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.28□□□□□ -1.89
KLF4O43474 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.28□□□□□ -1.89
KLF4O43474 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
KLF4O43474 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.27□□□□□ -1.89
KLF4O43474 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KLF4O43474 RNU6-545P-201ENST00000362681 104 ntBASIC3.27□□□□□ -1.89
KLF4O43474 RNA5SP197-201ENST00000363357 119 ntBASIC3.27□□□□□ -1.89
KLF4O43474 RNA5SP387-201ENST00000364226 106 ntBASIC3.27□□□□□ -1.89
KLF4O43474 RNA5SP51-201ENST00000364750 119 ntBASIC3.27□□□□□ -1.89
KLF4O43474 RNU6-326P-201ENST00000365480 107 ntBASIC3.27□□□□□ -1.89
KLF4O43474 Y_RNA.446-201ENST00000384178 104 ntBASIC3.27□□□□□ -1.89
KLF4O43474 Y_RNA.447-201ENST00000384184 113 ntBASIC3.27□□□□□ -1.89
KLF4O43474 Y_RNA.541-201ENST00000384640 113 ntBASIC3.27□□□□□ -1.89
KLF4O43474 RNU2-54P-201ENST00000410299 190 ntBASIC3.27□□□□□ -1.89
KLF4O43474 AC092427.1-202ENST00000430569 476 ntBASIC3.27□□□□□ -1.89
KLF4O43474 HSPE1P25-201ENST00000455484 251 ntBASIC3.27□□□□□ -1.89
KLF4O43474 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.27□□□□□ -1.89
KLF4O43474 AC091826.1-201ENST00000514065 313 ntBASIC3.27□□□□□ -1.89
KLF4O43474 RNU6-155P-201ENST00000516347 100 ntBASIC3.27□□□□□ -1.89
KLF4O43474 RNA5SP490-201ENST00000517141 136 ntBASIC3.27□□□□□ -1.89
KLF4O43474 AC026333.2-201ENST00000542164 106 ntBASIC3.27□□□□□ -1.89
KLF4O43474 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.27□□□□□ -1.89
KLF4O43474 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.27□□□□□ -1.89
KLF4O43474 AL109918.3-201ENST00000603072 338 ntBASIC3.27□□□□□ -1.89
KLF4O43474 AL590240.4-201ENST00000616908 390 ntBASIC3.27□□□□□ -1.89
KLF4O43474 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.27□□□□□ -1.89
KLF4O43474 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.27□□□□□ -1.89
KLF4O43474 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.27□□□□□ -1.89
KLF4O43474 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.27□□□□□ -1.89
KLF4O43474 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
KLF4O43474 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.26□□□□□ -1.89
KLF4O43474 FAM35CP-201ENST00000554755 2470 ntBASIC3.26□□□□□ -1.89
KLF4O43474 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
KLF4O43474 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KLF4O43474 SNORA20.1-201ENST00000364790 130 ntBASIC3.26□□□□□ -1.89
KLF4O43474 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
KLF4O43474 RNA5SP504-201ENST00000410676 117 ntBASIC3.26□□□□□ -1.89
KLF4O43474 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.26□□□□□ -1.89
KLF4O43474 AC139712.2-201ENST00000424302 339 ntBASIC3.26□□□□□ -1.89
KLF4O43474 AC024067.1-201ENST00000426199 223 ntBASIC3.26□□□□□ -1.89
KLF4O43474 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.26□□□□□ -1.89
KLF4O43474 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.26□□□□□ -1.89
KLF4O43474 RPL7P49-201ENST00000471402 708 ntBASIC3.26□□□□□ -1.89
KLF4O43474 HMGN2P9-201ENST00000476875 229 ntBASIC3.26□□□□□ -1.89
KLF4O43474 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.26□□□□□ -1.89
KLF4O43474 HMGB3P17-201ENST00000504195 649 ntBASIC3.26□□□□□ -1.89
KLF4O43474 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
KLF4O43474 RN7SKP282-201ENST00000516824 299 ntBASIC3.26□□□□□ -1.89
KLF4O43474 SCARNA24.2-201ENST00000516968 130 ntBASIC3.26□□□□□ -1.89
KLF4O43474 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.26□□□□□ -1.89
KLF4O43474 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.26□□□□□ -1.89
KLF4O43474 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.26□□□□□ -1.89
KLF4O43474 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
KLF4O43474 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
KLF4O43474 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KLF4O43474 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
KLF4O43474 AC009487.4-201ENST00000624969 3585 ntBASIC3.25□□□□□ -1.89
KLF4O43474 SNORA25.1-201ENST00000362326 128 ntBASIC3.25□□□□□ -1.89
KLF4O43474 Y_RNA.333-201ENST00000365274 102 ntBASIC3.25□□□□□ -1.89
KLF4O43474 Y_RNA.352-201ENST00000365439 102 ntBASIC3.25□□□□□ -1.89
KLF4O43474 AP002088.1-201ENST00000382740 395 ntBASIC3.25□□□□□ -1.89
KLF4O43474 RNU6-102P-201ENST00000384485 104 ntBASIC3.25□□□□□ -1.89
KLF4O43474 Y_RNA.562-201ENST00000384695 113 ntBASIC3.25□□□□□ -1.89
KLF4O43474 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KLF4O43474 RNU6-1248P-201ENST00000391096 64 ntBASIC3.25□□□□□ -1.89
KLF4O43474 SNORA11.1-201ENST00000408133 129 ntBASIC3.25□□□□□ -1.89
KLF4O43474 RPS29P4-201ENST00000414733 161 ntBASIC3.25□□□□□ -1.89
KLF4O43474 AC009963.1-201ENST00000417265 157 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms